Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CACNB3P54284 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CACNB3P54284 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CACNB3P54284 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CACNB3P54284 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNB3P54284 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNB3P54284 AC024681.1-201ENST00000521917 487 ntBASIC17.92■□□□□ 0.46
CACNB3P54284 MIR4706-201ENST00000582134 82 ntBASIC17.92■□□□□ 0.46
CACNB3P54284 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CACNB3P54284 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.92■□□□□ 0.46
CACNB3P54284 AF254983.2-201ENST00000612331 135 ntBASIC17.92■□□□□ 0.46
CACNB3P54284 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.92■□□□□ 0.46
CACNB3P54284 AC026691.1-201ENST00000602502 2017 ntBASIC17.92■□□□□ 0.46
CACNB3P54284 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CACNB3P54284 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CACNB3P54284 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNB3P54284 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CACNB3P54284 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNB3P54284 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNB3P54284 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.91■□□□□ 0.46
CACNB3P54284 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CACNB3P54284 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.91■□□□□ 0.46
CACNB3P54284 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.91■□□□□ 0.46
CACNB3P54284 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.91■□□□□ 0.46
CACNB3P54284 AC012618.1-201ENST00000461223 412 ntBASIC17.91■□□□□ 0.46
CACNB3P54284 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.91■□□□□ 0.46
CACNB3P54284 AC106794.1-201ENST00000506935 792 ntBASIC17.91■□□□□ 0.46
CACNB3P54284 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.91■□□□□ 0.46
CACNB3P54284 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNB3P54284 AC100827.2-201ENST00000563214 1194 ntBASIC17.91■□□□□ 0.46
CACNB3P54284 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.91■□□□□ 0.46
CACNB3P54284 AC138696.2-201ENST00000607376 223 ntBASIC17.91■□□□□ 0.46
CACNB3P54284 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNB3P54284 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNB3P54284 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNB3P54284 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNB3P54284 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 DOC2GP-204ENST00000639052 2548 ntBASIC17.9■□□□□ 0.46
CACNB3P54284 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 RN7SKP230-201ENST00000365642 335 ntBASIC17.9■□□□□ 0.46
CACNB3P54284 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 FXNP2-201ENST00000411625 547 ntBASIC17.9■□□□□ 0.46
CACNB3P54284 AC011742.3-201ENST00000439053 820 ntBASIC17.9■□□□□ 0.46
CACNB3P54284 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNB3P54284 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.9■□□□□ 0.46
CACNB3P54284 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.9■□□□□ 0.46
CACNB3P54284 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.9■□□□□ 0.46
CACNB3P54284 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.9■□□□□ 0.46
CACNB3P54284 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNB3P54284 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNB3P54284 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CACNB3P54284 AC068587.8-201ENST00000641239 219 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms