Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 FAM86MP-201ENST00000340703 885 ntBASIC13.14□□□□□ -0.31
CD40P25942 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CD40P25942 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.14□□□□□ -0.31
CD40P25942 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 ACTBP11-201ENST00000436287 1126 ntBASIC13.14□□□□□ -0.31
CD40P25942 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.14□□□□□ -0.31
CD40P25942 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 RN7SL219P-201ENST00000582872 296 ntBASIC13.14□□□□□ -0.31
CD40P25942 AC009542.2-202ENST00000619004 1067 ntBASIC13.14□□□□□ -0.31
CD40P25942 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 AC055811.4-201ENST00000624039 1754 ntBASIC13.14□□□□□ -0.31
CD40P25942 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.14□□□□□ -0.31
CD40P25942 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.14□□□□□ -0.31
CD40P25942 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CD40P25942 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 TMBIM7P-203ENST00000641617 1718 ntBASIC13.13□□□□□ -0.31
CD40P25942 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 REXO1L4P-201ENST00000605109 1937 ntBASIC13.13□□□□□ -0.31
CD40P25942 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.13□□□□□ -0.31
CD40P25942 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CD40P25942 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CD40P25942 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 MIR1908-201ENST00000410394 80 ntBASIC13.13□□□□□ -0.31
CD40P25942 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.13□□□□□ -0.31
CD40P25942 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.13□□□□□ -0.31
CD40P25942 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.13□□□□□ -0.31
CD40P25942 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.13□□□□□ -0.31
CD40P25942 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CD40P25942 RN7SL560P-201ENST00000577943 264 ntBASIC13.13□□□□□ -0.31
CD40P25942 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.13□□□□□ -0.31
CD40P25942 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD40P25942 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.13□□□□□ -0.31
CD40P25942 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms