Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HOXC6P09630 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HOXC6P09630 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HOXC6P09630 AC069218.1-201ENST00000435269 762 ntBASIC17.06■□□□□ 0.32
HOXC6P09630 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 HLA-J-204ENST00000495278 958 ntBASIC17.06■□□□□ 0.32
HOXC6P09630 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXC6P09630 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 AC008825.2-201ENST00000603374 718 ntBASIC17.06■□□□□ 0.32
HOXC6P09630 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXC6P09630 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXC6P09630 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXC6P09630 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 INE2-201ENST00000630399 1874 ntBASIC17.05■□□□□ 0.32
HOXC6P09630 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 AC009093.2-202ENST00000620513 2079 ntBASIC17.05■□□□□ 0.32
HOXC6P09630 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXC6P09630 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HOXC6P09630 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 VDAC1P1-201ENST00000439229 848 ntBASIC17.05■□□□□ 0.32
HOXC6P09630 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC6P09630 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC6P09630 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC6P09630 AC009779.1-201ENST00000551138 283 ntBASIC17.05■□□□□ 0.32
HOXC6P09630 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC6P09630 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HOXC6P09630 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXC6P09630 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC6P09630 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXC6P09630 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXC6P09630 E2F3P2-201ENST00000447755 1422 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC6P09630 PRAL-201ENST00000624952 3286 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 AL157414.3-201ENST00000624276 1954 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HOXC6P09630 MST1L-201ENST00000442552 2185 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 AC026316.1-201ENST00000398900 414 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 AC019193.1-201ENST00000506678 823 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 AC116345.2-201ENST00000512837 523 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 MIR3147-201ENST00000577811 66 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC6P09630 MIR4754-201ENST00000582477 89 ntBASIC17.04■□□□□ 0.32
HOXC6P09630 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC6P09630 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC6P09630 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
HOXC6P09630 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
HOXC6P09630 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC6P09630 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms