Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 AC011474.4-201ENST00000623523 2076 ntBASIC15.91■□□□□ 0.14
CCDC188H7C350 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 AL590627.1-203ENST00000421194 1026 ntBASIC15.91■□□□□ 0.14
CCDC188H7C350 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 SAMD11P1-201ENST00000571429 661 ntBASIC15.91■□□□□ 0.14
CCDC188H7C350 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC188H7C350 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
CCDC188H7C350 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CCDC188H7C350 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC188H7C350 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC188H7C350 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC188H7C350 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC188H7C350 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC188H7C350 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 AL121723.1-201ENST00000445194 1519 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CCDC188H7C350 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC188H7C350 TOMM22P5-201ENST00000416399 439 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC188H7C350 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC188H7C350 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC188H7C350 KRT126P-201ENST00000549467 1181 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 AL079307.3-201ENST00000556114 283 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 AC040169.1-201ENST00000565382 521 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC188H7C350 AC025048.3-201ENST00000590609 569 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 AC005702.4-201ENST00000618393 416 ntBASIC15.9■□□□□ 0.14
CCDC188H7C350 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCDC188H7C350 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC188H7C350 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC188H7C350 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC188H7C350 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC188H7C350 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC188H7C350 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
CCDC188H7C350 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC188H7C350 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC188H7C350 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC188H7C350 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms