Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SPTLC1P5-201ENST00000450718 252 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 CSH2-206ENST00000560142 749 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AC100827.2-201ENST00000563214 1194 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AC068587.8-201ENST00000641239 219 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AL162727.3-201ENST00000635661 2787 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 PAUPAR-201ENST00000630360 2965 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 EID1-202ENST00000560490 584 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 MIR3619-201ENST00000579667 83 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 AC026740.1-201ENST00000607068 791 ntBASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC144AA2RUR9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 MARK2P5-201ENST00000507649 634 ntBASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC144AA2RUR9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 SALL4P5-201ENST00000419001 1760 ntBASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 CYP46A4P-201ENST00000414953 267 ntBASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 CHMP4BP1-201ENST00000556017 588 ntBASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AC105129.2-201ENST00000559536 390 ntBASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AC008825.2-201ENST00000603374 718 ntBASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC144AA2RUR9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms