Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC239868.1-201ENST00000369385 493 ntBASIC16.15■□□□□ 0.18
RAD9AQ99638 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.15■□□□□ 0.18
RAD9AQ99638 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AC008825.2-201ENST00000603374 718 ntBASIC16.15■□□□□ 0.18
RAD9AQ99638 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.15■□□□□ 0.18
RAD9AQ99638 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 INE2-201ENST00000630399 1874 ntBASIC16.15■□□□□ 0.18
RAD9AQ99638 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.15■□□□□ 0.18
RAD9AQ99638 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAD9AQ99638 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAD9AQ99638 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAD9AQ99638 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
RAD9AQ99638 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAD9AQ99638 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 AC092364.2-201ENST00000596710 2692 ntBASIC16.14■□□□□ 0.17
RAD9AQ99638 DOC2GP-204ENST00000639052 2548 ntBASIC16.14■□□□□ 0.17
RAD9AQ99638 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAD9AQ99638 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAD9AQ99638 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 AC009093.2-202ENST00000620513 2079 ntBASIC16.14■□□□□ 0.17
RAD9AQ99638 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAD9AQ99638 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.14■□□□□ 0.17
RAD9AQ99638 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RAD9AQ99638 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RAD9AQ99638 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RAD9AQ99638 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RAD9AQ99638 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAD9AQ99638 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.14■□□□□ 0.17
RAD9AQ99638 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.14■□□□□ 0.17
RAD9AQ99638 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.14■□□□□ 0.17
RAD9AQ99638 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.14■□□□□ 0.17
RAD9AQ99638 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.14■□□□□ 0.17
RAD9AQ99638 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.14■□□□□ 0.17
RAD9AQ99638 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.14■□□□□ 0.17
RAD9AQ99638 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
RAD9AQ99638 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.14■□□□□ 0.17
RAD9AQ99638 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 AL008718.2-201ENST00000609206 1313 ntBASIC16.14■□□□□ 0.17
RAD9AQ99638 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAD9AQ99638 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.14■□□□□ 0.17
RAD9AQ99638 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RAD9AQ99638 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.13■□□□□ 0.17
RAD9AQ99638 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAD9AQ99638 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAD9AQ99638 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAD9AQ99638 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RAD9AQ99638 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAD9AQ99638 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.13■□□□□ 0.17
RAD9AQ99638 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms