Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRUNE2Q8WUY3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AC080013.5-201ENST00000607044 679 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AC010976.2-201ENST00000609697 852 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AC018629.1-201ENST00000623381 1736 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 ACTG1P19-201ENST00000418987 1116 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 MAGEA7P-201ENST00000436482 942 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 AC254633.1-201ENST00000606790 345 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 MARK2P16-201ENST00000605714 1723 ntBASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRUNE2Q8WUY3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 PTGER4P2-201ENST00000328411 252 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 BPIFB5P-201ENST00000457066 1099 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 PTGER4P3-201ENST00000458150 252 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 RNA5SP359-201ENST00000364838 113 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 RN7SKP109-201ENST00000410592 316 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 AC026434.2-201ENST00000506094 1078 ntBASIC15.48■□□□□ 0.07
PRUNE2Q8WUY3 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms