Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LYSMD2Q8IV50 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MRPL20P1-201ENST00000400819 433 ntBASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 AC087388.1-201ENST00000571370 1112 ntBASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LYSMD2Q8IV50 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 INE2-201ENST00000630399 1874 ntBASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
LYSMD2Q8IV50 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LYSMD2Q8IV50 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms