Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL133338.1-201ENST00000565695 1517 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17■□□□□ 0.31
TRIM50Q86XT4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 AC055811.4-201ENST00000624039 1754 ntBASIC17■□□□□ 0.31
TRIM50Q86XT4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 RPL5P21-201ENST00000404620 815 ntBASIC17■□□□□ 0.31
TRIM50Q86XT4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 POM121L8P-201ENST00000417732 1281 ntBASIC17■□□□□ 0.31
TRIM50Q86XT4 AC245100.3-201ENST00000441281 285 ntBASIC17■□□□□ 0.31
TRIM50Q86XT4 POM121L9P-203ENST00000441984 1285 ntBASIC17■□□□□ 0.31
TRIM50Q86XT4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17■□□□□ 0.31
TRIM50Q86XT4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17■□□□□ 0.31
TRIM50Q86XT4 AC104306.2-201ENST00000451877 341 ntBASIC17■□□□□ 0.31
TRIM50Q86XT4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17■□□□□ 0.31
TRIM50Q86XT4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17■□□□□ 0.31
TRIM50Q86XT4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17■□□□□ 0.31
TRIM50Q86XT4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM50Q86XT4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17■□□□□ 0.31
TRIM50Q86XT4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM50Q86XT4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 AC104457.1-201ENST00000401024 814 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 BTBD6P1-201ENST00000412176 1267 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 GPAA1P2-201ENST00000417923 928 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 AL591846.1-201ENST00000451736 433 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 AC022616.1-201ENST00000518688 554 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 OR10B1P-201ENST00000601666 907 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 AL096828.3-201ENST00000615354 462 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 AL023775.1-201ENST00000454907 1746 ntBASIC16.99■□□□□ 0.31
TRIM50Q86XT4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRIM50Q86XT4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms