Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 FAM86C2P-203ENST00000528684 1004 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AP002472.1-201ENST00000577490 586 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AC004835.2-201ENST00000603762 682 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AL355385.1-201ENST00000606123 409 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AL365330.1-201ENST00000607459 531 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AL078644.1-201ENST00000609881 752 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 ACTL9-202ENST00000612068 1252 ntBASIC13.47□□□□□ -0.25
C11orf88Q6PI97 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.47□□□□□ -0.25
C11orf88Q6PI97 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 METTL21AP1-201ENST00000438852 635 ntBASIC13.46□□□□□ -0.25
C11orf88Q6PI97 AL513480.1-201ENST00000451731 511 ntBASIC13.46□□□□□ -0.25
C11orf88Q6PI97 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 AC027796.2-201ENST00000575326 344 ntBASIC13.46□□□□□ -0.25
C11orf88Q6PI97 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.46□□□□□ -0.25
C11orf88Q6PI97 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf88Q6PI97 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf88Q6PI97 SLC22A20-204ENST00000530038 1673 ntBASIC13.46□□□□□ -0.26
C11orf88Q6PI97 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.26
C11orf88Q6PI97 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.26
C11orf88Q6PI97 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf88Q6PI97 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
C11orf88Q6PI97 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf88Q6PI97 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 AC148477.4-201ENST00000613430 1793 ntBASIC13.45□□□□□ -0.26
C11orf88Q6PI97 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf88Q6PI97 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms