Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDH1Q08174 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 CICP23-201ENST00000605013 2741 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 SPDYE19P-201ENST00000338590 713 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 NUS1P3-201ENST00000423502 862 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.78□□□□□ -0.04
PCDH1Q08174 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.78□□□□□ -0.04
PCDH1Q08174 AC055876.2-201ENST00000531834 546 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 AJ011932.1-201ENST00000621707 465 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PCDH1Q08174 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PCDH1Q08174 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.78□□□□□ -0.04
PCDH1Q08174 CICP24-201ENST00000605464 2705 ntBASIC14.78□□□□□ -0.04
PCDH1Q08174 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDH1Q08174 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCDH1Q08174 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCDH1Q08174 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDH1Q08174 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.77□□□□□ -0.04
PCDH1Q08174 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.77□□□□□ -0.04
PCDH1Q08174 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 LILRP1-201ENST00000444199 1370 ntBASIC14.77□□□□□ -0.04
PCDH1Q08174 AL391825.1-201ENST00000457671 1364 ntBASIC14.77□□□□□ -0.04
PCDH1Q08174 AL390755.1-201ENST00000623716 2027 ntBASIC14.77□□□□□ -0.04
PCDH1Q08174 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PCDH1Q08174 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDH1Q08174 AL442647.2-201ENST00000429864 857 ntBASIC14.77□□□□□ -0.05
PCDH1Q08174 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDH1Q08174 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDH1Q08174 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDH1Q08174 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDH1Q08174 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.77□□□□□ -0.05
PCDH1Q08174 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 AL049840.4-201ENST00000602422 811 ntBASIC14.77□□□□□ -0.05
PCDH1Q08174 AC107373.2-201ENST00000607735 490 ntBASIC14.77□□□□□ -0.05
PCDH1Q08174 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.77□□□□□ -0.05
PCDH1Q08174 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.77□□□□□ -0.05
PCDH1Q08174 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PCDH1Q08174 AL009178.2-201ENST00000597278 2719 ntBASIC14.77□□□□□ -0.05
PCDH1Q08174 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
PCDH1Q08174 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCDH1Q08174 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH1Q08174 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PCDH1Q08174 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms