Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.23■□□□□ 0.35
CCNA1P78396 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCNA1P78396 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.23■□□□□ 0.35
CCNA1P78396 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CCNA1P78396 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 AC138696.2-201ENST00000607376 223 ntBASIC17.23■□□□□ 0.35
CCNA1P78396 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.23■□□□□ 0.35
CCNA1P78396 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCNA1P78396 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.23■□□□□ 0.35
CCNA1P78396 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCNA1P78396 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNA1P78396 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 AL157414.3-201ENST00000624276 1954 ntBASIC17.22■□□□□ 0.35
CCNA1P78396 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNA1P78396 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CCNA1P78396 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNA1P78396 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNA1P78396 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.22■□□□□ 0.35
CCNA1P78396 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.22■□□□□ 0.35
CCNA1P78396 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.22■□□□□ 0.35
CCNA1P78396 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCNA1P78396 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.22■□□□□ 0.35
CCNA1P78396 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCNA1P78396 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNA1P78396 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNA1P78396 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.22■□□□□ 0.35
CCNA1P78396 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 PCDH8P1-201ENST00000428983 2773 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCNA1P78396 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 RN7SKP214-201ENST00000364208 315 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.21■□□□□ 0.35
CCNA1P78396 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.21■□□□□ 0.35
CCNA1P78396 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CCNA1P78396 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 AC234782.1-201ENST00000451950 919 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.21■□□□□ 0.35
CCNA1P78396 PRKXP1-201ENST00000561423 1122 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms