Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
VBP1P61758 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 PHKG1P2-201ENST00000457537 863 ntBASIC13.77□□□□□ -0.21
VBP1P61758 TPT1P11-201ENST00000458482 498 ntBASIC13.77□□□□□ -0.21
VBP1P61758 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 DUX4L26-201ENST00000489078 1255 ntBASIC13.77□□□□□ -0.21
VBP1P61758 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.77□□□□□ -0.21
VBP1P61758 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.77□□□□□ -0.21
VBP1P61758 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 AC006557.2-201ENST00000592985 1240 ntBASIC13.77□□□□□ -0.21
VBP1P61758 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.77□□□□□ -0.21
VBP1P61758 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.77□□□□□ -0.21
VBP1P61758 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VBP1P61758 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.77□□□□□ -0.21
VBP1P61758 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
VBP1P61758 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
VBP1P61758 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.76□□□□□ -0.21
VBP1P61758 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 FAM185BP-201ENST00000443595 716 ntBASIC13.76□□□□□ -0.21
VBP1P61758 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 AC012615.1-201ENST00000565797 1299 ntBASIC13.76□□□□□ -0.21
VBP1P61758 AL031432.2-201ENST00000566714 459 ntBASIC13.76□□□□□ -0.21
VBP1P61758 AL928711.1-201ENST00000570165 459 ntBASIC13.76□□□□□ -0.21
VBP1P61758 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.76□□□□□ -0.21
VBP1P61758 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.76□□□□□ -0.21
VBP1P61758 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.76□□□□□ -0.21
VBP1P61758 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.76□□□□□ -0.21
VBP1P61758 AC133561.5-201ENST00000635547 218 ntBASIC13.76□□□□□ -0.21
VBP1P61758 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.76□□□□□ -0.21
VBP1P61758 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VBP1P61758 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VBP1P61758 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 AC015818.8-201ENST00000587907 1519 ntBASIC13.75□□□□□ -0.21
VBP1P61758 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VBP1P61758 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.75□□□□□ -0.21
VBP1P61758 AC005332.1-201ENST00000577698 1310 ntBASIC13.75□□□□□ -0.21
VBP1P61758 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VBP1P61758 AC004899.2-201ENST00000622993 3860 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms