Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.79■□□□□ 0.28
LBX1P52954 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.79■□□□□ 0.28
LBX1P52954 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.79■□□□□ 0.28
LBX1P52954 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LBX1P52954 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.78■□□□□ 0.28
LBX1P52954 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 AL157823.1-201ENST00000403727 628 ntBASIC16.78■□□□□ 0.28
LBX1P52954 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 AC104961.1-201ENST00000427605 771 ntBASIC16.78■□□□□ 0.28
LBX1P52954 SLC25A15P1-201ENST00000456738 342 ntBASIC16.78■□□□□ 0.28
LBX1P52954 AC092896.1-201ENST00000465850 380 ntBASIC16.78■□□□□ 0.28
LBX1P52954 SLC25A15P3-201ENST00000505530 290 ntBASIC16.78■□□□□ 0.28
LBX1P52954 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.78■□□□□ 0.28
LBX1P52954 AC006116.2-201ENST00000589958 988 ntBASIC16.78■□□□□ 0.28
LBX1P52954 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 AC006986.1-201ENST00000612764 241 ntBASIC16.78■□□□□ 0.28
LBX1P52954 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.78■□□□□ 0.28
LBX1P52954 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LBX1P52954 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LBX1P52954 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.78■□□□□ 0.28
LBX1P52954 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 AL157414.3-201ENST00000624276 1954 ntBASIC16.78■□□□□ 0.28
LBX1P52954 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LBX1P52954 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
LBX1P52954 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LBX1P52954 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.78■□□□□ 0.28
LBX1P52954 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.77■□□□□ 0.28
LBX1P52954 FUCA1P1-201ENST00000374476 1351 ntBASIC16.77■□□□□ 0.28
LBX1P52954 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 TEKT4P2-202ENST00000559466 1312 ntBASIC16.77■□□□□ 0.28
LBX1P52954 AL008638.4-201ENST00000624792 1315 ntBASIC16.77■□□□□ 0.28
LBX1P52954 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.77■□□□□ 0.28
LBX1P52954 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.77■□□□□ 0.28
LBX1P52954 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.77■□□□□ 0.28
LBX1P52954 AL512599.1-201ENST00000430724 685 ntBASIC16.77■□□□□ 0.28
LBX1P52954 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.77■□□□□ 0.28
LBX1P52954 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 RN7SL173P-201ENST00000461853 292 ntBASIC16.77■□□□□ 0.28
LBX1P52954 AC026412.1-206ENST00000502273 206 ntBASIC16.77■□□□□ 0.28
LBX1P52954 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.77■□□□□ 0.28
LBX1P52954 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.77■□□□□ 0.28
LBX1P52954 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.77■□□□□ 0.28
LBX1P52954 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.77■□□□□ 0.28
LBX1P52954 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.77■□□□□ 0.28
LBX1P52954 EEF1DP7-201ENST00000580496 513 ntBASIC16.77■□□□□ 0.28
LBX1P52954 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.77■□□□□ 0.28
LBX1P52954 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC16.77■□□□□ 0.28
LBX1P52954 AC009145.4-201ENST00000625119 1294 ntBASIC16.77■□□□□ 0.28
LBX1P52954 AL357143.1-203ENST00000639750 881 ntBASIC16.77■□□□□ 0.28
LBX1P52954 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LBX1P52954 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LBX1P52954 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LBX1P52954 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LBX1P52954 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms