Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 AC022726.2-201ENST00000634673 547 ntBASIC15.15■□□□□ 0.02
VARSP26640 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VARSP26640 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 LINC00528-201ENST00000600723 2160 ntBASIC15.15■□□□□ 0.02
VARSP26640 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.15■□□□□ 0.02
VARSP26640 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.15■□□□□ 0.02
VARSP26640 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VARSP26640 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
VARSP26640 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.14■□□□□ 0.01
VARSP26640 LINC01101-201ENST00000622953 1884 ntBASIC15.14■□□□□ 0.01
VARSP26640 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 AGAP7P-201ENST00000582299 2062 ntBASIC15.14■□□□□ 0.01
VARSP26640 AGAP14-201ENST00000624701 2060 ntBASIC15.14■□□□□ 0.01
VARSP26640 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.14■□□□□ 0.01
VARSP26640 AL353779.1-201ENST00000434793 351 ntBASIC15.14■□□□□ 0.01
VARSP26640 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.14■□□□□ 0.01
VARSP26640 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 GPR53P-205ENST00000457298 1084 ntBASIC15.14■□□□□ 0.01
VARSP26640 AC091917.2-201ENST00000505002 744 ntBASIC15.14■□□□□ 0.01
VARSP26640 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 SLED1-202ENST00000512051 380 ntBASIC15.14■□□□□ 0.01
VARSP26640 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.14■□□□□ 0.01
VARSP26640 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.14■□□□□ 0.01
VARSP26640 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.14■□□□□ 0.01
VARSP26640 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
VARSP26640 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.14■□□□□ 0.01
VARSP26640 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.14■□□□□ 0.01
VARSP26640 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
VARSP26640 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.14■□□□□ 0.01
VARSP26640 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VARSP26640 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.14■□□□□ 0.01
VARSP26640 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.14■□□□□ 0.01
VARSP26640 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.13■□□□□ 0.01
VARSP26640 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.13■□□□□ 0.01
VARSP26640 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.13■□□□□ 0.01
VARSP26640 ATP5G2P4-201ENST00000442175 420 ntBASIC15.13■□□□□ 0.01
VARSP26640 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.13■□□□□ 0.01
VARSP26640 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.13■□□□□ 0.01
VARSP26640 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms