Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
NF1P21359 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 RN7SKP175-201ENST00000408472 289 ntBASIC12.12□□□□□ -0.47
NF1P21359 DPY19L2P5-201ENST00000456300 331 ntBASIC12.12□□□□□ -0.47
NF1P21359 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.12□□□□□ -0.47
NF1P21359 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.12□□□□□ -0.47
NF1P21359 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC12.12□□□□□ -0.47
NF1P21359 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.12□□□□□ -0.47
NF1P21359 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.12□□□□□ -0.47
NF1P21359 AC026471.1-201ENST00000564629 3026 ntBASIC12.12□□□□□ -0.47
NF1P21359 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NF1P21359 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.12□□□□□ -0.47
NF1P21359 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.11□□□□□ -0.47
NF1P21359 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 VDAC1P1-201ENST00000439229 848 ntBASIC12.11□□□□□ -0.47
NF1P21359 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.11□□□□□ -0.47
NF1P21359 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.11□□□□□ -0.47
NF1P21359 BCRP4-201ENST00000506079 804 ntBASIC12.11□□□□□ -0.47
NF1P21359 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.11□□□□□ -0.47
NF1P21359 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 SIGLEC18P-201ENST00000602271 909 ntBASIC12.11□□□□□ -0.47
NF1P21359 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 PCDHA14-201ENST00000506751 2298 ntBASIC12.11□□□□□ -0.47
NF1P21359 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.11□□□□□ -0.47
NF1P21359 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.11□□□□□ -0.47
NF1P21359 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 AL807761.2-201ENST00000422849 729 ntBASIC12.11□□□□□ -0.47
NF1P21359 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.11□□□□□ -0.47
NF1P21359 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.11□□□□□ -0.47
NF1P21359 FBXO36P1-201ENST00000579006 471 ntBASIC12.11□□□□□ -0.47
NF1P21359 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 AC008972.2-201ENST00000606587 494 ntBASIC12.11□□□□□ -0.47
NF1P21359 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NF1P21359 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 AC005865.2-202ENST00000635814 725 ntBASIC12.11□□□□□ -0.47
NF1P21359 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
NF1P21359 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.11□□□□□ -0.47
NF1P21359 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NF1P21359 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.11□□□□□ -0.47
NF1P21359 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.11□□□□□ -0.47
NF1P21359 AC012508.2-201ENST00000567613 1472 ntBASIC12.11□□□□□ -0.47
NF1P21359 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NF1P21359 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.1□□□□□ -0.47
NF1P21359 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.1□□□□□ -0.47
NF1P21359 RPS18P9-201ENST00000482817 460 ntBASIC12.1□□□□□ -0.47
NF1P21359 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.1□□□□□ -0.47
NF1P21359 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.1□□□□□ -0.47
NF1P21359 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 AC092862.1-201ENST00000541534 533 ntBASIC12.1□□□□□ -0.47
NF1P21359 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.1□□□□□ -0.47
NF1P21359 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.1□□□□□ -0.47
NF1P21359 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
NF1P21359 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NF1P21359 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NF1P21359 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
NF1P21359 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
NF1P21359 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
NF1P21359 KRT8P6-201ENST00000399259 1207 ntBASIC12.1□□□□□ -0.47
NF1P21359 MIR1301-201ENST00000408518 82 ntBASIC12.1□□□□□ -0.47
NF1P21359 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms