Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
NELFEP18615 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 RPL13P2-201ENST00000440687 659 ntBASIC15.22■□□□□ 0.03
NELFEP18615 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.22■□□□□ 0.03
NELFEP18615 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.22■□□□□ 0.03
NELFEP18615 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 LINC01115-203ENST00000606068 577 ntBASIC15.22■□□□□ 0.03
NELFEP18615 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.22■□□□□ 0.03
NELFEP18615 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 AC134407.2-201ENST00000625089 1978 ntBASIC15.22■□□□□ 0.03
NELFEP18615 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 AC005912.2-201ENST00000619492 2400 ntBASIC15.22■□□□□ 0.03
NELFEP18615 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NELFEP18615 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NELFEP18615 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NELFEP18615 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.21■□□□□ 0.03
NELFEP18615 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.21■□□□□ 0.03
NELFEP18615 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.21■□□□□ 0.03
NELFEP18615 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
NELFEP18615 TARDBPP1-201ENST00000442013 1203 ntBASIC15.21■□□□□ 0.03
NELFEP18615 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 INE1-201ENST00000456273 945 ntBASIC15.21■□□□□ 0.03
NELFEP18615 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 ELK1P1-201ENST00000485699 580 ntBASIC15.21■□□□□ 0.03
NELFEP18615 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NELFEP18615 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.21■□□□□ 0.03
NELFEP18615 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NELFEP18615 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFEP18615 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
NELFEP18615 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NELFEP18615 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NELFEP18615 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFEP18615 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 MIR600HG-201ENST00000449175 5984 ntBASIC15.2■□□□□ 0.02
NELFEP18615 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFEP18615 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NELFEP18615 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFEP18615 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms