Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL3L1P16619 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCL3L1P16619 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC098614.1-201ENST00000368528 745 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC104457.1-201ENST00000401024 814 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL3L1P16619 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL3L1P16619 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 AL596325.1-201ENST00000563991 1082 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL3L1P16619 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC105233.6-201ENST00000642093 218 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3L1P16619 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 AC012508.2-201ENST00000567613 1472 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3L1P16619 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3L1P16619 REXO1L2P-201ENST00000425429 2069 ntBASIC12.63□□□□□ -0.39
CCL3L1P16619 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 WASH3P-207ENST00000560956 1394 ntBASIC12.62□□□□□ -0.39
CCL3L1P16619 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCL3L1P16619 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.62□□□□□ -0.39
CCL3L1P16619 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.62□□□□□ -0.39
CCL3L1P16619 CLUHP6-201ENST00000580789 941 ntBASIC12.62□□□□□ -0.39
CCL3L1P16619 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3L1P16619 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CCL3L1P16619 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3L1P16619 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3L1P16619 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3L1P16619 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms