Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBC1P01850 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBC1P01850 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.31■□□□□ 0.04
TRBC1P01850 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBC1P01850 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.31■□□□□ 0.04
TRBC1P01850 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 AC233724.13-201ENST00000598383 410 ntBASIC15.31■□□□□ 0.04
TRBC1P01850 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBC1P01850 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBC1P01850 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBC1P01850 REXO1L2P-201ENST00000425429 2069 ntBASIC15.31■□□□□ 0.04
TRBC1P01850 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBC1P01850 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRBC1P01850 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRBC1P01850 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TRBC1P01850 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 AC005229.1-201ENST00000392885 409 ntBASIC15.3■□□□□ 0.04
TRBC1P01850 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 AL355864.2-201ENST00000447420 863 ntBASIC15.3■□□□□ 0.04
TRBC1P01850 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
TRBC1P01850 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.3■□□□□ 0.04
TRBC1P01850 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.3■□□□□ 0.04
TRBC1P01850 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBC1P01850 BTNL10-201ENST00000595971 695 ntBASIC15.3■□□□□ 0.04
TRBC1P01850 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBC1P01850 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRBC1P01850 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBC1P01850 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBC1P01850 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBC1P01850 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBC1P01850 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBC1P01850 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRBC1P01850 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms