Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM35Q9UPQ4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 AC106820.3-201ENST00000561653 397 ntBASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 C2orf69P2-201ENST00000562032 1123 ntBASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 AC008687.7-202ENST00000637404 953 ntBASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM35Q9UPQ4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 TPM3P8-201ENST00000330554 643 ntBASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 AC006058.4-201ENST00000624016 1670 ntBASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM35Q9UPQ4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM35Q9UPQ4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms