Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.97■□□□□ 0.15
SMOQ99835 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SMOQ99835 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SMOQ99835 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.97■□□□□ 0.15
SMOQ99835 RPS2P32-201ENST00000439199 892 ntBASIC15.97■□□□□ 0.15
SMOQ99835 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.97■□□□□ 0.15
SMOQ99835 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.97■□□□□ 0.15
SMOQ99835 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.97■□□□□ 0.15
SMOQ99835 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
SMOQ99835 AC006453.4-201ENST00000636949 1252 ntBASIC15.97■□□□□ 0.15
SMOQ99835 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SMOQ99835 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
SMOQ99835 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 AC104640.1-201ENST00000562617 2109 ntBASIC15.97■□□□□ 0.15
SMOQ99835 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SMOQ99835 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SMOQ99835 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SMOQ99835 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.97■□□□□ 0.15
SMOQ99835 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SMOQ99835 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 AC023157.3-201ENST00000619086 2088 ntBASIC15.96■□□□□ 0.15
SMOQ99835 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 LINC00554-201ENST00000564841 3011 ntBASIC15.96■□□□□ 0.15
SMOQ99835 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.96■□□□□ 0.15
SMOQ99835 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.96■□□□□ 0.15
SMOQ99835 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.96■□□□□ 0.15
SMOQ99835 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SMOQ99835 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 CD8B2-202ENST00000417670 633 ntBASIC15.96■□□□□ 0.15
SMOQ99835 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.96■□□□□ 0.15
SMOQ99835 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.96■□□□□ 0.15
SMOQ99835 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 MIR6752-201ENST00000618442 71 ntBASIC15.96■□□□□ 0.15
SMOQ99835 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SMOQ99835 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.96■□□□□ 0.15
SMOQ99835 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SMOQ99835 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SMOQ99835 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
SMOQ99835 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.96■□□□□ 0.14
SMOQ99835 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SMOQ99835 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SMOQ99835 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SMOQ99835 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
SMOQ99835 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.95■□□□□ 0.14
SMOQ99835 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms