Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC092364.2-201ENST00000596710 2692 ntBASIC15.68■□□□□ 0.1
CDCA3Q99618 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.68■□□□□ 0.1
CDCA3Q99618 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.68■□□□□ 0.1
CDCA3Q99618 AL035414.1-201ENST00000451327 857 ntBASIC15.68■□□□□ 0.1
CDCA3Q99618 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 AC079112.1-201ENST00000454972 939 ntBASIC15.68■□□□□ 0.1
CDCA3Q99618 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.68■□□□□ 0.1
CDCA3Q99618 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CDCA3Q99618 YRDCP1-201ENST00000621419 643 ntBASIC15.68■□□□□ 0.1
CDCA3Q99618 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 FRMPD2B-201ENST00000431305 1347 ntBASIC15.68■□□□□ 0.1
CDCA3Q99618 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 AC099398.1-201ENST00000567919 2776 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 OR2K2-202ENST00000374428 1038 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 AP000356.3-201ENST00000382243 753 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.67■□□□□ 0.1
CDCA3Q99618 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.67■□□□□ 0.1
CDCA3Q99618 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.67■□□□□ 0.1
CDCA3Q99618 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.67■□□□□ 0.1
CDCA3Q99618 AC138894.2-201ENST00000602838 371 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 AL157813.1-201ENST00000612996 587 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 LINC01783-202ENST00000614408 828 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 BX284668.2-205ENST00000619677 828 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 AC027601.3-201ENST00000622907 509 ntBASIC15.67■□□□□ 0.1
CDCA3Q99618 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.67■□□□□ 0.1
CDCA3Q99618 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDCA3Q99618 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.67■□□□□ 0.1
CDCA3Q99618 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CDCA3Q99618 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.66■□□□□ 0.1
CDCA3Q99618 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.66■□□□□ 0.1
CDCA3Q99618 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDCA3Q99618 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms