Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 AC106881.1-201ENST00000605849 3329 ntBASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB11FIP4Q86YS3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 MROH4P-201ENST00000431302 1578 ntBASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 AJ011931.1-201ENST00000618749 2492 ntBASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 RN7SL692P-201ENST00000464677 288 ntBASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 RPSAP52-203ENST00000622976 1023 ntBASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 AC005252.2-201ENST00000624630 1141 ntBASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 KRT8P22-201ENST00000562317 1415 ntBASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB11FIP4Q86YS3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RAB11FIP4Q86YS3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RAB11FIP4Q86YS3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RAB11FIP4Q86YS3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 AL158070.2-201ENST00000623713 1621 ntBASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 AL442647.2-201ENST00000429864 857 ntBASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB11FIP4Q86YS3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms