Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 C2orf27AP3-201ENST00000434123 579 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 EIF3FP3-201ENST00000434851 1086 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 AL354718.3-201ENST00000616414 581 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 AC132938.4-201ENST00000623835 848 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 CR382287.1-201ENST00000623954 586 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 AL157414.3-201ENST00000624276 1954 ntBASIC18.16■□□□□ 0.5
CTR9Q6PD62 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTR9Q6PD62 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.16■□□□□ 0.5
CTR9Q6PD62 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 REXO1L4P-201ENST00000605109 1937 ntBASIC18.15■□□□□ 0.5
CTR9Q6PD62 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 AC026954.1-201ENST00000429771 1293 ntBASIC18.15■□□□□ 0.5
CTR9Q6PD62 FAM197Y7-201ENST00000432892 766 ntBASIC18.15■□□□□ 0.5
CTR9Q6PD62 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 CSF2RBP1-201ENST00000447905 391 ntBASIC18.15■□□□□ 0.5
CTR9Q6PD62 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTR9Q6PD62 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CTR9Q6PD62 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTR9Q6PD62 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTR9Q6PD62 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CTR9Q6PD62 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.14■□□□□ 0.49
CTR9Q6PD62 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.14■□□□□ 0.49
CTR9Q6PD62 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.14■□□□□ 0.49
CTR9Q6PD62 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTR9Q6PD62 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CTR9Q6PD62 HLA-V-201ENST00000429037 534 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms