Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 LINC01783-202ENST00000614408 828 ntBASIC18.92■□□□□ 0.62
RC3H1Q5TC82 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 BX284668.2-205ENST00000619677 828 ntBASIC18.92■□□□□ 0.62
RC3H1Q5TC82 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 CYP4F23P-201ENST00000593402 1579 ntBASIC18.92■□□□□ 0.62
RC3H1Q5TC82 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RC3H1Q5TC82 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AP000356.3-201ENST00000382243 753 ntBASIC18.91■□□□□ 0.62
RC3H1Q5TC82 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 MIR3188-201ENST00000583494 85 ntBASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RC3H1Q5TC82 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RC3H1Q5TC82 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms