Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDKN2DP55273 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 AC018442.1-201ENST00000421439 2061 ntBASIC15.12■□□□□ 0.01
CDKN2DP55273 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN2DP55273 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDKN2DP55273 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDKN2DP55273 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.12■□□□□ 0.01
CDKN2DP55273 AL353779.1-201ENST00000434793 351 ntBASIC15.12■□□□□ 0.01
CDKN2DP55273 VDAC1P7-201ENST00000462417 847 ntBASIC15.12■□□□□ 0.01
CDKN2DP55273 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.12■□□□□ 0.01
CDKN2DP55273 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.12■□□□□ 0.01
CDKN2DP55273 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDKN2DP55273 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CDKN2DP55273 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN2DP55273 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDKN2DP55273 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 AL138799.1-201ENST00000448213 1675 ntBASIC15.12■□□□□ 0.01
CDKN2DP55273 AC093525.8-201ENST00000624099 1342 ntBASIC15.12■□□□□ 0.01
CDKN2DP55273 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDKN2DP55273 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 AC139749.1-202ENST00000617529 3139 ntBASIC15.11■□□□□ 0.01
CDKN2DP55273 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 HLA-K-203ENST00000430151 1046 ntBASIC15.11■□□□□ 0.01
CDKN2DP55273 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 CYMP-203ENST00000474680 1263 ntBASIC15.11■□□□□ 0.01
CDKN2DP55273 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.11■□□□□ 0.01
CDKN2DP55273 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.11■□□□□ 0.01
CDKN2DP55273 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN2DP55273 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.11■□□□□ 0.01
CDKN2DP55273 MIR8072-201ENST00000614241 80 ntBASIC15.11■□□□□ 0.01
CDKN2DP55273 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
CDKN2DP55273 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CDKN2DP55273 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDKN2DP55273 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKN2DP55273 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CDKN2DP55273 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.1■□□□□ 0.01
CDKN2DP55273 AL158070.2-201ENST00000623713 1621 ntBASIC15.1■□□□□ 0.01
CDKN2DP55273 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2DP55273 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CDKN2DP55273 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDKN2DP55273 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.1■□□□□ 0.01
CDKN2DP55273 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms