Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AL132655.2-201ENST00000596276 594 ntBASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC099568.2-201ENST00000609194 695 ntBASIC13.67□□□□□ -0.22
CSNK1A1P48729 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC012508.2-201ENST00000567613 1472 ntBASIC13.67□□□□□ -0.22
CSNK1A1P48729 AC007541.1-201ENST00000570282 1469 ntBASIC13.67□□□□□ -0.22
CSNK1A1P48729 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1A1P48729 AGAP7P-201ENST00000582299 2062 ntBASIC13.67□□□□□ -0.22
CSNK1A1P48729 AGAP14-201ENST00000624701 2060 ntBASIC13.67□□□□□ -0.22
CSNK1A1P48729 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1A1P48729 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC087499.6-201ENST00000411576 835 ntBASIC13.66□□□□□ -0.22
CSNK1A1P48729 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 VDAC1P7-201ENST00000462417 847 ntBASIC13.66□□□□□ -0.22
CSNK1A1P48729 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 SAMD11P1-201ENST00000571429 661 ntBASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 LINC02560-201ENST00000596379 459 ntBASIC13.66□□□□□ -0.22
CSNK1A1P48729 AC093726.1-201ENST00000608064 963 ntBASIC13.66□□□□□ -0.22
CSNK1A1P48729 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 AL391825.1-201ENST00000457671 1364 ntBASIC13.66□□□□□ -0.22
CSNK1A1P48729 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1A1P48729 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1A1P48729 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1A1P48729 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1A1P48729 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms