Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC21.04■□□□□ 0.96
CPS1P31327 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CPS1P31327 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPS1P31327 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC21.04■□□□□ 0.96
CPS1P31327 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CPS1P31327 AC012073.1-201ENST00000606114 1108 ntBASIC21.04■□□□□ 0.96
CPS1P31327 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CPS1P31327 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 AC092127.1-201ENST00000567093 3455 ntBASIC21.03■□□□□ 0.96
CPS1P31327 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CPS1P31327 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.03■□□□□ 0.96
CPS1P31327 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CPS1P31327 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.03■□□□□ 0.96
CPS1P31327 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.03■□□□□ 0.96
CPS1P31327 ALG3P1-201ENST00000508806 1114 ntBASIC21.03■□□□□ 0.96
CPS1P31327 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.03■□□□□ 0.96
CPS1P31327 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC21.03■□□□□ 0.96
CPS1P31327 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.03■□□□□ 0.96
CPS1P31327 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC21.03■□□□□ 0.96
CPS1P31327 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC21.03■□□□□ 0.96
CPS1P31327 AL139339.2-201ENST00000608063 657 ntBASIC21.03■□□□□ 0.96
CPS1P31327 MIR6720-201ENST00000611664 98 ntBASIC21.03■□□□□ 0.96
CPS1P31327 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 AC136759.1-202ENST00000530858 2194 ntBASIC21.03■□□□□ 0.96
CPS1P31327 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPS1P31327 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC21.02■□□□□ 0.96
CPS1P31327 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.02■□□□□ 0.96
CPS1P31327 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CPS1P31327 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.02■□□□□ 0.96
CPS1P31327 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CPS1P31327 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.02■□□□□ 0.96
CPS1P31327 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CPS1P31327 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC21.02■□□□□ 0.96
CPS1P31327 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.02■□□□□ 0.96
CPS1P31327 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.02■□□□□ 0.96
CPS1P31327 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.02■□□□□ 0.96
CPS1P31327 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC21.02■□□□□ 0.96
CPS1P31327 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC21.02■□□□□ 0.96
CPS1P31327 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.02■□□□□ 0.96
CPS1P31327 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 HMGB1P24-201ENST00000611897 328 ntBASIC21.02■□□□□ 0.96
CPS1P31327 TP53-221ENST00000615910 1149 ntTSL 5 BASIC21.02■□□□□ 0.96
CPS1P31327 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
CPS1P31327 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CPS1P31327 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPS1P31327 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.02■□□□□ 0.96
CPS1P31327 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.02■□□□□ 0.95
CPS1P31327 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.02■□□□□ 0.95
CPS1P31327 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CPS1P31327 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.01■□□□□ 0.95
CPS1P31327 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.01■□□□□ 0.95
CPS1P31327 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC21.01■□□□□ 0.95
CPS1P31327 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CPS1P31327 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CPS1P31327 BANF1P3-201ENST00000412556 261 ntBASIC21.01■□□□□ 0.95
CPS1P31327 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.01■□□□□ 0.95
CPS1P31327 PGAM1P12-201ENST00000505622 748 ntBASIC21.01■□□□□ 0.95
CPS1P31327 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.01■□□□□ 0.95
CPS1P31327 AC021016.3-201ENST00000608367 477 ntBASIC21.01■□□□□ 0.95
CPS1P31327 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 AC006058.4-201ENST00000624016 1670 ntBASIC21.01■□□□□ 0.95
CPS1P31327 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 ENPP7P8-202ENST00000527856 1345 ntBASIC21.01■□□□□ 0.95
CPS1P31327 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CPS1P31327 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21■□□□□ 0.95
CPS1P31327 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPS1P31327 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPS1P31327 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPS1P31327 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms