Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 AC023157.3-201ENST00000619086 2088 ntBASIC14.12□□□□□ -0.15
ABCD3P28288 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.12□□□□□ -0.15
ABCD3P28288 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 AC093433.1-201ENST00000458048 571 ntBASIC14.12□□□□□ -0.15
ABCD3P28288 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 AC022137.2-201ENST00000503482 481 ntBASIC14.12□□□□□ -0.15
ABCD3P28288 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 PTP4A1P2-201ENST00000546033 454 ntBASIC14.12□□□□□ -0.15
ABCD3P28288 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 PRSS30P-206ENST00000641773 873 ntBASIC14.12□□□□□ -0.15
ABCD3P28288 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ABCD3P28288 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.12□□□□□ -0.15
ABCD3P28288 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 AC091951.1-201ENST00000512854 2465 ntBASIC14.12□□□□□ -0.15
ABCD3P28288 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ABCD3P28288 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ABCD3P28288 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
ABCD3P28288 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 C8orf49-201ENST00000525043 1968 ntBASIC14.11□□□□□ -0.15
ABCD3P28288 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 AP000845.1-201ENST00000581677 2131 ntBASIC14.11□□□□□ -0.15
ABCD3P28288 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.11□□□□□ -0.15
ABCD3P28288 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ABCD3P28288 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 RNU1-114P-201ENST00000365297 166 ntBASIC14.11□□□□□ -0.15
ABCD3P28288 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ABCD3P28288 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ABCD3P28288 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCD3P28288 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCD3P28288 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCD3P28288 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.11□□□□□ -0.15
ABCD3P28288 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.11□□□□□ -0.15
ABCD3P28288 AC008735.3-201ENST00000596646 500 ntBASIC14.11□□□□□ -0.15
ABCD3P28288 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.11□□□□□ -0.15
ABCD3P28288 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.11□□□□□ -0.15
ABCD3P28288 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
ABCD3P28288 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 AC063926.2-201ENST00000623766 1308 ntBASIC14.11□□□□□ -0.15
ABCD3P28288 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ABCD3P28288 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
ABCD3P28288 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
ABCD3P28288 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ABCD3P28288 WASH3P-207ENST00000560956 1394 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms