Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL5A2P05997 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.62■□□□□ 0.73
COL5A2P05997 AP003680.1-201ENST00000598970 3660 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.62■□□□□ 0.73
COL5A2P05997 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.62■□□□□ 0.73
COL5A2P05997 AL139008.1-201ENST00000437894 228 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 AL035414.1-201ENST00000451327 857 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC19.62■□□□□ 0.73
COL5A2P05997 MIR5196-201ENST00000578146 115 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 NUDT4P2-201ENST00000578341 546 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 AL022334.2-201ENST00000610000 484 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.62■□□□□ 0.73
COL5A2P05997 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL5A2P05997 SALL4P5-201ENST00000419001 1760 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 AC007292.2-201ENST00000593524 1812 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 AC090616.6-203ENST00000579186 1945 ntBASIC19.62■□□□□ 0.73
COL5A2P05997 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
COL5A2P05997 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
COL5A2P05997 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.62■□□□□ 0.73
COL5A2P05997 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL5A2P05997 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC19.61■□□□□ 0.73
COL5A2P05997 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL5A2P05997 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 PCDHB19P-201ENST00000570871 2371 ntBASIC19.61■□□□□ 0.73
COL5A2P05997 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.61■□□□□ 0.73
COL5A2P05997 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.61■□□□□ 0.73
COL5A2P05997 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL5A2P05997 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 AL022344.2-201ENST00000568976 968 ntBASIC19.6■□□□□ 0.73
COL5A2P05997 AP000845.1-201ENST00000581677 2131 ntBASIC19.6■□□□□ 0.73
COL5A2P05997 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
COL5A2P05997 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.6■□□□□ 0.73
COL5A2P05997 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.6■□□□□ 0.73
COL5A2P05997 AC114947.1-202ENST00000514136 344 ntBASIC19.6■□□□□ 0.73
COL5A2P05997 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.6■□□□□ 0.73
COL5A2P05997 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL5A2P05997 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC19.6■□□□□ 0.73
COL5A2P05997 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms