Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTA1P02549 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SPTA1P02549 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SPTA1P02549 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 AL357373.1-201ENST00000394974 322 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTA1P02549 AC114812.1-204ENST00000449669 728 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 AC116345.2-201ENST00000512837 523 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 AC138466.3-201ENST00000619983 221 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 AC127024.7-201ENST00000625101 200 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 AC092364.2-201ENST00000596710 2692 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 AC022188.1-201ENST00000620960 1664 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 SNX15-201ENST00000352068 771 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC13.82□□□□□ -0.2
SPTA1P02549 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 AC097359.3-201ENST00000603982 1210 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 AL358472.3-201ENST00000608147 415 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 AP001002.3-201ENST00000623482 206 ntBASIC13.82□□□□□ -0.2
SPTA1P02549 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SPTA1P02549 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SPTA1P02549 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SPTA1P02549 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTA1P02549 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SPTA1P02549 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.81□□□□□ -0.2
SPTA1P02549 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 TUBB8P8-201ENST00000458717 1058 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 POU5F1P2-201ENST00000521750 823 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.81□□□□□ -0.2
SPTA1P02549 MIR6842-201ENST00000612539 65 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 AC138466.4-201ENST00000623965 852 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 FAM90A2P-201ENST00000511144 1395 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 FAM90A25P-201ENST00000528404 1395 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SPTA1P02549 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SPTA1P02549 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 ME2P1-201ENST00000426028 1970 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SPTA1P02549 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTA1P02549 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.81□□□□□ -0.2
SPTA1P02549 RNMTL1P1-201ENST00000454103 560 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 AC021723.1-201ENST00000486306 515 ntBASIC13.81□□□□□ -0.2
SPTA1P02549 AC010234.1-201ENST00000494599 870 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms