Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH16O75309 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDH16O75309 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 TARDBPP1-201ENST00000442013 1203 ntBASIC15.53■□□□□ 0.08
CDH16O75309 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 DNAJB3-201ENST00000446806 729 ntBASIC15.53■□□□□ 0.08
CDH16O75309 SPDYE11-202ENST00000450699 704 ntBASIC15.53■□□□□ 0.08
CDH16O75309 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 RARRES2P9-201ENST00000565168 469 ntBASIC15.53■□□□□ 0.08
CDH16O75309 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 SPDYE9P-201ENST00000570642 692 ntBASIC15.53■□□□□ 0.08
CDH16O75309 SPDYE10P-202ENST00000612005 668 ntBASIC15.53■□□□□ 0.08
CDH16O75309 SPDYE8P-202ENST00000612377 668 ntBASIC15.53■□□□□ 0.08
CDH16O75309 AC084121.4-201ENST00000641598 221 ntBASIC15.53■□□□□ 0.08
CDH16O75309 AF228730.8-201ENST00000642140 221 ntBASIC15.53■□□□□ 0.08
CDH16O75309 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH16O75309 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH16O75309 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH16O75309 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH16O75309 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CDH16O75309 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDH16O75309 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDH16O75309 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDH16O75309 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 MIR940-201ENST00000401276 94 ntBASIC15.52■□□□□ 0.08
CDH16O75309 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 SPDYE17-201ENST00000412399 783 ntBASIC15.52■□□□□ 0.08
CDH16O75309 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 TPT1P11-201ENST00000458482 498 ntBASIC15.52■□□□□ 0.08
CDH16O75309 POLD2P1-201ENST00000511220 997 ntBASIC15.52■□□□□ 0.08
CDH16O75309 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH16O75309 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH16O75309 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH16O75309 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH16O75309 AL671883.3-201ENST00000603274 991 ntBASIC15.52■□□□□ 0.08
CDH16O75309 AC092865.6-201ENST00000642101 219 ntBASIC15.52■□□□□ 0.08
CDH16O75309 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH16O75309 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.52■□□□□ 0.07
CDH16O75309 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH16O75309 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms