Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LDB3O75112 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 INE1-201ENST00000456273 945 ntBASIC14.41□□□□□ -0.1
LDB3O75112 RN7SL837P-201ENST00000463010 287 ntBASIC14.41□□□□□ -0.1
LDB3O75112 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LDB3O75112 ENPP7P5-201ENST00000541031 1031 ntBASIC14.41□□□□□ -0.1
LDB3O75112 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.41□□□□□ -0.1
LDB3O75112 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
LDB3O75112 CLUHP6-201ENST00000580789 941 ntBASIC14.41□□□□□ -0.1
LDB3O75112 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.41□□□□□ -0.1
LDB3O75112 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.41□□□□□ -0.1
LDB3O75112 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LDB3O75112 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.41□□□□□ -0.1
LDB3O75112 AL358472.5-202ENST00000641448 1267 ntBASIC14.41□□□□□ -0.1
LDB3O75112 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 AC012508.2-201ENST00000567613 1472 ntBASIC14.41□□□□□ -0.1
LDB3O75112 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LDB3O75112 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LDB3O75112 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LDB3O75112 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LDB3O75112 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 WASH3P-207ENST00000560956 1394 ntBASIC14.4□□□□□ -0.1
LDB3O75112 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.4□□□□□ -0.1
LDB3O75112 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.4□□□□□ -0.1
LDB3O75112 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LDB3O75112 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.4□□□□□ -0.1
LDB3O75112 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
LDB3O75112 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LDB3O75112 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 AC011495.1-201ENST00000498085 584 ntBASIC14.4□□□□□ -0.1
LDB3O75112 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.4□□□□□ -0.1
LDB3O75112 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.4□□□□□ -0.1
LDB3O75112 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LDB3O75112 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LDB3O75112 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LDB3O75112 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LDB3O75112 AC132938.2-201ENST00000579188 680 ntBASIC14.4□□□□□ -0.1
LDB3O75112 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.4□□□□□ -0.1
LDB3O75112 AC010319.3-201ENST00000597028 470 ntBASIC14.4□□□□□ -0.1
LDB3O75112 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms