Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC007881.3-201ENST00000608897 607 ntBASIC20.37■□□□□ 0.85
SBNO1A3KN83 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 LINC02199-201ENST00000506655 2702 ntBASIC20.37■□□□□ 0.85
SBNO1A3KN83 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SBNO1A3KN83 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.37■□□□□ 0.85
SBNO1A3KN83 AC020910.5-201ENST00000623668 1865 ntBASIC20.37■□□□□ 0.85
SBNO1A3KN83 AC099398.1-201ENST00000567919 2776 ntBASIC20.36■□□□□ 0.85
SBNO1A3KN83 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 ALG3P1-201ENST00000508806 1114 ntBASIC20.36■□□□□ 0.85
SBNO1A3KN83 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC009884.2-201ENST00000603110 324 ntBASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC005632.3-201ENST00000605544 308 ntBASIC20.36■□□□□ 0.85
SBNO1A3KN83 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC084018.2-201ENST00000613093 2607 ntBASIC20.36■□□□□ 0.85
SBNO1A3KN83 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SBNO1A3KN83 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC138932.1-201ENST00000534164 6830 ntBASIC20.36■□□□□ 0.85
SBNO1A3KN83 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SBNO1A3KN83 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 RPL17P45-201ENST00000586289 509 ntBASIC20.35■□□□□ 0.85
SBNO1A3KN83 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 MIR6720-201ENST00000611664 98 ntBASIC20.35■□□□□ 0.85
SBNO1A3KN83 AC009084.3-201ENST00000623356 437 ntBASIC20.35■□□□□ 0.85
SBNO1A3KN83 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 REXO1L4P-201ENST00000605109 1937 ntBASIC20.35■□□□□ 0.85
SBNO1A3KN83 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 AC026691.1-201ENST00000602502 2017 ntBASIC20.35■□□□□ 0.85
SBNO1A3KN83 OR6D1P-202ENST00000641007 5290 ntBASIC20.35■□□□□ 0.85
SBNO1A3KN83 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SBNO1A3KN83 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SBNO1A3KN83 AP003680.1-201ENST00000598970 3660 ntBASIC20.34■□□□□ 0.85
SBNO1A3KN83 NAGK-204ENST00000443872 878 ntTSL 3 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 NDUFS6P1-201ENST00000485187 316 ntBASIC20.34■□□□□ 0.85
SBNO1A3KN83 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.34■□□□□ 0.85
SBNO1A3KN83 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.34■□□□□ 0.85
SBNO1A3KN83 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SBNO1A3KN83 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms