Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 SYT6-210ENST00000641643 1587 ntBASIC27.19■■□□□ 1.94
SNCAIPQ9Y6H5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SNCAIPQ9Y6H5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNCAIPQ9Y6H5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNCAIPQ9Y6H5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.19■■□□□ 1.94
SNCAIPQ9Y6H5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.18■■□□□ 1.94
SNCAIPQ9Y6H5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNCAIPQ9Y6H5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
SNCAIPQ9Y6H5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNCAIPQ9Y6H5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNCAIPQ9Y6H5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 MAG-206ENST00000597035 542 ntTSL 4 BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNCAIPQ9Y6H5 SERBP1P1-201ENST00000396021 1160 ntBASIC27.16■■□□□ 1.94
SNCAIPQ9Y6H5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.16■■□□□ 1.94
SNCAIPQ9Y6H5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SNCAIPQ9Y6H5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SNCAIPQ9Y6H5 AC010501.1-201ENST00000606270 1962 ntBASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 AC097381.1-201ENST00000429019 1296 ntBASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 CA15P2-201ENST00000611168 834 ntBASIC27.15■■□□□ 1.94
SNCAIPQ9Y6H5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC27.14■■□□□ 1.94
SNCAIPQ9Y6H5 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.14■■□□□ 1.94
SNCAIPQ9Y6H5 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.14■■□□□ 1.94
SNCAIPQ9Y6H5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SNCAIPQ9Y6H5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SNCAIPQ9Y6H5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
SNCAIPQ9Y6H5 AC131274.2-201ENST00000580697 1507 ntBASIC27.13■■□□□ 1.93
SNCAIPQ9Y6H5 AC087623.3-201ENST00000607047 1098 ntBASIC27.13■■□□□ 1.93
SNCAIPQ9Y6H5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNCAIPQ9Y6H5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNCAIPQ9Y6H5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SNCAIPQ9Y6H5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNCAIPQ9Y6H5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNCAIPQ9Y6H5 AC092171.4-201ENST00000609130 632 ntBASIC27.12■■□□□ 1.93
SNCAIPQ9Y6H5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 RASA4CP-201ENST00000424092 1398 ntBASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SNCAIPQ9Y6H5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 AC099791.2-201ENST00000605725 427 ntBASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.1■■□□□ 1.93
SNCAIPQ9Y6H5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.09■■□□□ 1.93
SNCAIPQ9Y6H5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNCAIPQ9Y6H5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
SNCAIPQ9Y6H5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC27.08■■□□□ 1.93
SNCAIPQ9Y6H5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNCAIPQ9Y6H5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNCAIPQ9Y6H5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 AL162430.1-201ENST00000480705 870 ntBASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 AC027682.1-201ENST00000562846 899 ntBASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.07■■□□□ 1.92
SNCAIPQ9Y6H5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SNCAIPQ9Y6H5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27.06■■□□□ 1.92
SNCAIPQ9Y6H5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
SNCAIPQ9Y6H5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 AC011298.3-201ENST00000615796 283 ntBASIC27.05■■□□□ 1.92
SNCAIPQ9Y6H5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms