Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 KRT16P3-201ENST00000439127 1283 ntBASIC24.68■■□□□ 1.54
SNX25Q9H3E2 AL356441.2-201ENST00000443009 864 ntBASIC24.68■■□□□ 1.54
SNX25Q9H3E2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.68■■□□□ 1.54
SNX25Q9H3E2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.67■■□□□ 1.54
SNX25Q9H3E2 MTDHP2-201ENST00000601468 714 ntBASIC24.67■■□□□ 1.54
SNX25Q9H3E2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SNX25Q9H3E2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNX25Q9H3E2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 SNX5-217ENST00000606557 1087 ntBASIC24.65■■□□□ 1.54
SNX25Q9H3E2 AC010997.5-201ENST00000609182 354 ntBASIC24.65■■□□□ 1.54
SNX25Q9H3E2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX25Q9H3E2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
SNX25Q9H3E2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.64■■□□□ 1.54
SNX25Q9H3E2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
SNX25Q9H3E2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.64■■□□□ 1.53
SNX25Q9H3E2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.64■■□□□ 1.53
SNX25Q9H3E2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNX25Q9H3E2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.62■■□□□ 1.53
SNX25Q9H3E2 AL022069.1-201ENST00000568025 1636 ntBASIC24.62■■□□□ 1.53
SNX25Q9H3E2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNX25Q9H3E2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.62■■□□□ 1.53
SNX25Q9H3E2 AC004448.1-201ENST00000458332 883 ntBASIC24.62■■□□□ 1.53
SNX25Q9H3E2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SNX25Q9H3E2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNX25Q9H3E2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNX25Q9H3E2 AC131274.2-201ENST00000580697 1507 ntBASIC24.61■■□□□ 1.53
SNX25Q9H3E2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNX25Q9H3E2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNX25Q9H3E2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNX25Q9H3E2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNX25Q9H3E2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNX25Q9H3E2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNX25Q9H3E2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.6■■□□□ 1.53
SNX25Q9H3E2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SNX25Q9H3E2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNX25Q9H3E2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNX25Q9H3E2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNX25Q9H3E2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
SNX25Q9H3E2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNX25Q9H3E2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNX25Q9H3E2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNX25Q9H3E2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SNX25Q9H3E2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SNX25Q9H3E2 AC131212.1-201ENST00000613771 668 ntBASIC24.58■■□□□ 1.53
SNX25Q9H3E2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.58■■□□□ 1.53
SNX25Q9H3E2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.58■■□□□ 1.53
SNX25Q9H3E2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.58■■□□□ 1.52
SNX25Q9H3E2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.58■■□□□ 1.52
SNX25Q9H3E2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNX25Q9H3E2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SNX25Q9H3E2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNX25Q9H3E2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.57■■□□□ 1.52
SNX25Q9H3E2 MIR6722-201ENST00000617286 78 ntBASIC24.57■■□□□ 1.52
SNX25Q9H3E2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNX25Q9H3E2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 AC135731.1-201ENST00000569415 2548 ntBASIC24.56■■□□□ 1.52
SNX25Q9H3E2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNX25Q9H3E2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms