Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCN4BQ8IWT1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.42■■□□□ 1.5
SCN4BQ8IWT1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.41■■□□□ 1.5
SCN4BQ8IWT1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 AC022211.4-201ENST00000625094 2161 ntBASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 AC004448.1-201ENST00000458332 883 ntBASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 AL356740.2-201ENST00000601559 647 ntBASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 MIR6722-201ENST00000617286 78 ntBASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCN4BQ8IWT1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
SCN4BQ8IWT1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SCN4BQ8IWT1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.39■■□□□ 1.5
SCN4BQ8IWT1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.39■■□□□ 1.49
SCN4BQ8IWT1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 MIR3621-201ENST00000580529 85 ntBASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.38■■□□□ 1.49
SCN4BQ8IWT1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 AC131274.2-201ENST00000580697 1507 ntBASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCN4BQ8IWT1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 AC131281.2-201ENST00000520478 145 ntBASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.36■■□□□ 1.49
SCN4BQ8IWT1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCN4BQ8IWT1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.34■■□□□ 1.49
SCN4BQ8IWT1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 HLA-L-211ENST00000482052 1765 ntBASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SCN4BQ8IWT1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.33■■□□□ 1.48
SCN4BQ8IWT1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCN4BQ8IWT1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms