Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CROCCP3Q8IVE0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CROCCP3Q8IVE0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
CROCCP3Q8IVE0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.86■□□□□ 0.93
CROCCP3Q8IVE0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CROCCP3Q8IVE0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CROCCP3Q8IVE0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CROCCP3Q8IVE0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CROCCP3Q8IVE0 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.83■□□□□ 0.92
CROCCP3Q8IVE0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CROCCP3Q8IVE0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.83■□□□□ 0.92
CROCCP3Q8IVE0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CROCCP3Q8IVE0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 AC073130.3-201ENST00000624389 2278 ntBASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CROCCP3Q8IVE0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP3Q8IVE0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP3Q8IVE0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.8■□□□□ 0.92
CROCCP3Q8IVE0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.8■□□□□ 0.92
CROCCP3Q8IVE0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP3Q8IVE0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CROCCP3Q8IVE0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CROCCP3Q8IVE0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms