Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ckap4Q8BMK4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ckap4Q8BMK4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.53■□□□□ 0.72
Ckap4Q8BMK4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ckap4Q8BMK4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ckap4Q8BMK4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ckap4Q8BMK4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ckap4Q8BMK4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ckap4Q8BMK4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ckap4Q8BMK4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ckap4Q8BMK4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ckap4Q8BMK4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ckap4Q8BMK4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms