Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HLA-L-211ENST00000482052 1765 ntBASIC22.76■■□□□ 1.23
LRRTM4Q86VH4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.75■■□□□ 1.23
LRRTM4Q86VH4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LRRTM4Q86VH4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.75■■□□□ 1.23
LRRTM4Q86VH4 SNX5-217ENST00000606557 1087 ntBASIC22.75■■□□□ 1.23
LRRTM4Q86VH4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.75■■□□□ 1.23
LRRTM4Q86VH4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 AC010997.5-201ENST00000609182 354 ntBASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRTM4Q86VH4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRRTM4Q86VH4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
LRRTM4Q86VH4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 AC004448.1-201ENST00000458332 883 ntBASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 AC131274.2-201ENST00000580697 1507 ntBASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.71■■□□□ 1.23
LRRTM4Q86VH4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
LRRTM4Q86VH4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
LRRTM4Q86VH4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.7■■□□□ 1.22
LRRTM4Q86VH4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.7■■□□□ 1.22
LRRTM4Q86VH4 AL022069.1-201ENST00000568025 1636 ntBASIC22.7■■□□□ 1.22
LRRTM4Q86VH4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LRRTM4Q86VH4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRTM4Q86VH4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 MIR6722-201ENST00000617286 78 ntBASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRTM4Q86VH4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 AC131212.1-201ENST00000613771 668 ntBASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRTM4Q86VH4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 MIR6724-1-201ENST00000616420 92 ntBASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 MIR6724-2-201ENST00000616483 92 ntBASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 MIR6724-4-201ENST00000617390 92 ntBASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 MIR6724-3-201ENST00000622482 92 ntBASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 AL161729.1-201ENST00000604104 1402 ntBASIC22.65■■□□□ 1.22
LRRTM4Q86VH4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
LRRTM4Q86VH4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.64■■□□□ 1.21
LRRTM4Q86VH4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.64■■□□□ 1.21
LRRTM4Q86VH4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRTM4Q86VH4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRTM4Q86VH4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.64■■□□□ 1.21
LRRTM4Q86VH4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
LRRTM4Q86VH4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms