Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 RPL12AYEL054C 498 nt4.37□□□□□ -1.71
HRD1Q08109 NPY1YGL067W 1155 nt4.37□□□□□ -1.71
HRD1Q08109 PGU1YJR153W 1086 nt4.37□□□□□ -1.71
HRD1Q08109 SEC13YLR208W 894 nt4.37□□□□□ -1.71
HRD1Q08109 IES1YFL013C 2079 nt4.37□□□□□ -1.71
HRD1Q08109 RTT106YNL206C 1368 nt4.37□□□□□ -1.71
HRD1Q08109 YGR266WYGR266W 2106 nt4.36□□□□□ -1.71
HRD1Q08109 ERD1YDR414C 1089 nt4.36□□□□□ -1.71
HRD1Q08109 XPT1YJR133W 630 nt4.36□□□□□ -1.71
HRD1Q08109 CDC21YOR074C 915 nt4.36□□□□□ -1.71
HRD1Q08109 YBR056C-BYBR056C-B 159 nt4.36□□□□□ -1.71
HRD1Q08109 MDR1YGR100W 2853 nt4.36□□□□□ -1.71
HRD1Q08109 ECM7YLR443W 1347 nt4.36□□□□□ -1.71
HRD1Q08109 BIT2YBR270C 1638 nt4.35□□□□□ -1.71
HRD1Q08109 FZO1YBR179C 2568 nt4.35□□□□□ -1.71
HRD1Q08109 FRE1YLR214W 2061 nt4.35□□□□□ -1.71
HRD1Q08109 PCT1YGR202C 1275 nt4.35□□□□□ -1.71
HRD1Q08109 MRP17YKL003C 396 nt4.35□□□□□ -1.71
HRD1Q08109 SOL1YNR034W 966 nt4.35□□□□□ -1.71
HRD1Q08109 ISU2YOR226C 471 nt4.35□□□□□ -1.71
HRD1Q08109 YPL041CYPL041C 624 nt4.35□□□□□ -1.71
HRD1Q08109 NOP7YGR103W 1818 nt4.35□□□□□ -1.71
HRD1Q08109 TSL1YML100W 3297 nt4.34□□□□□ -1.71
HRD1Q08109 YTA12YMR089C 2478 nt4.34□□□□□ -1.71
HRD1Q08109 YDR401WYDR401W 564 nt4.34□□□□□ -1.71
HRD1Q08109 UTR4YEL038W 684 nt4.34□□□□□ -1.71
HRD1Q08109 RPL34AYER056C-A 366 nt4.34□□□□□ -1.71
HRD1Q08109 YHL049CYHL049C 816 nt4.34□□□□□ -1.71
HRD1Q08109 PRP45YAL032C 1140 nt4.34□□□□□ -1.71
HRD1Q08109 KTR3YBR205W 1215 nt4.34□□□□□ -1.71
HRD1Q08109 ABF1YKL112W 2196 nt4.34□□□□□ -1.72
HRD1Q08109 YNL247WYNL247W 2304 nt4.34□□□□□ -1.72
HRD1Q08109 PAL1YDR348C 1500 nt4.33□□□□□ -1.72
HRD1Q08109 YPT32YGL210W 669 nt4.33□□□□□ -1.72
HRD1Q08109 GTO1YGR154C 1071 nt4.33□□□□□ -1.72
HRD1Q08109 EGD2YHR193C 525 nt4.33□□□□□ -1.72
HRD1Q08109 YJR115WYJR115W 510 nt4.33□□□□□ -1.72
HRD1Q08109 CSR1YLR380W 1227 nt4.33□□□□□ -1.72
HRD1Q08109 DCI1YOR180C 816 nt4.33□□□□□ -1.72
HRD1Q08109 DCC1YCL016C 1143 nt4.33□□□□□ -1.72
HRD1Q08109 HRK1YOR267C 2280 nt4.33□□□□□ -1.72
HRD1Q08109 NUP1YOR098C 3231 nt4.33□□□□□ -1.72
HRD1Q08109 ATG20YDL113C 1923 nt4.33□□□□□ -1.72
HRD1Q08109 SUM1YDR310C 3189 nt4.32□□□□□ -1.72
HRD1Q08109 APM2YHL019C 1818 nt4.32□□□□□ -1.72
HRD1Q08109 MGS1YNL218W 1764 nt4.32□□□□□ -1.72
HRD1Q08109 CTS1YLR286C 1689 nt4.32□□□□□ -1.72
HRD1Q08109 SLT2YHR030C 1455 nt4.32□□□□□ -1.72
HRD1Q08109 ZUO1YGR285C 1302 nt4.32□□□□□ -1.72
HRD1Q08109 HOT1YMR172W 2160 nt4.32□□□□□ -1.72
HRD1Q08109 YHR193C-AYHR193C-A 375 nt4.32□□□□□ -1.72
HRD1Q08109 DCN1YLR128W 810 nt4.32□□□□□ -1.72
HRD1Q08109 SAC1YKL212W 1872 nt4.32□□□□□ -1.72
HRD1Q08109 KRS1YDR037W 1776 nt4.31□□□□□ -1.72
HRD1Q08109 CAF4YKR036C 1932 nt4.31□□□□□ -1.72
HRD1Q08109 MEC3YLR288C 1425 nt4.3□□□□□ -1.72
HRD1Q08109 TRM44YPL030W 1704 nt4.3□□□□□ -1.72
HRD1Q08109 CUE2YKL090W 1332 nt4.3□□□□□ -1.72
HRD1Q08109 AAD4YDL243C 990 nt4.3□□□□□ -1.72
HRD1Q08109 TFB3YDR460W 966 nt4.3□□□□□ -1.72
HRD1Q08109 CBF1YJR060W 1056 nt4.3□□□□□ -1.72
HRD1Q08109 SSP120YLR250W 705 nt4.3□□□□□ -1.72
HRD1Q08109 NPT1YOR209C 1290 nt4.3□□□□□ -1.72
HRD1Q08109 CDC19YAL038W 1503 nt4.3□□□□□ -1.72
HRD1Q08109 PHO8YDR481C 1701 nt4.29□□□□□ -1.72
HRD1Q08109 MPH2YDL247W 1830 nt4.29□□□□□ -1.72
HRD1Q08109 AVT3YKL146W 2079 nt4.29□□□□□ -1.72
HRD1Q08109 YEF1YEL041W 1488 nt4.29□□□□□ -1.72
HRD1Q08109 ICE2YIL090W 1476 nt4.29□□□□□ -1.72
HRD1Q08109 COQ6YGR255C 1440 nt4.29□□□□□ -1.72
HRD1Q08109 BRL1YHR036W 1416 nt4.29□□□□□ -1.72
HRD1Q08109 CTT1YGR088W 1689 nt4.29□□□□□ -1.72
HRD1Q08109 ESF1YDR365C 1887 nt4.28□□□□□ -1.72
HRD1Q08109 SAP155YFR040W 3009 nt4.28□□□□□ -1.72
HRD1Q08109 TUB3YML124C 1338 nt4.28□□□□□ -1.72
HRD1Q08109 IPK1YDR315C 846 nt4.28□□□□□ -1.72
HRD1Q08109 NAG1YGR031C-A 492 nt4.28□□□□□ -1.72
HRD1Q08109 YJU2YKL095W 837 nt4.28□□□□□ -1.72
HRD1Q08109 YMR030W-AYMR030W-A 291 nt4.28□□□□□ -1.72
HRD1Q08109 snR19snR19 568 nt4.28□□□□□ -1.72
HRD1Q08109 GAL10YBR019C 2100 nt4.28□□□□□ -1.72
HRD1Q08109 THI20YOL055C 1656 nt4.28□□□□□ -1.72
HRD1Q08109 GDE1YPL110C 3672 nt4.28□□□□□ -1.72
HRD1Q08109 HXT14YNL318C 1623 nt4.28□□□□□ -1.72
HRD1Q08109 TFC7YOR110W 1308 nt4.27□□□□□ -1.73
HRD1Q08109 IWR1YDL115C 1062 nt4.27□□□□□ -1.73
HRD1Q08109 SNN1YNL086W 309 nt4.27□□□□□ -1.73
HRD1Q08109 RPL21BYPL079W 483 nt4.27□□□□□ -1.73
HRD1Q08109 YAP1YML007W 1953 nt4.27□□□□□ -1.73
HRD1Q08109 YGL036WYGL036W 2730 nt4.27□□□□□ -1.73
HRD1Q08109 MCM4YPR019W 2802 nt4.27□□□□□ -1.73
HRD1Q08109 MTF2YDL044C 1323 nt4.26□□□□□ -1.73
HRD1Q08109 ENP1YBR247C 1452 nt4.26□□□□□ -1.73
HRD1Q08109 SPL2YHR136C 447 nt4.26□□□□□ -1.73
HRD1Q08109 SCW10YMR305C 1170 nt4.26□□□□□ -1.73
HRD1Q08109 YDL124WYDL124W 939 nt4.25□□□□□ -1.73
HRD1Q08109 MHF2YDL160C-A 243 nt4.25□□□□□ -1.73
HRD1Q08109 TDH3YGR192C 999 nt4.25□□□□□ -1.73
HRD1Q08109 POM33YLL023C 840 nt4.25□□□□□ -1.73
HRD1Q08109 RER2YBR002C 861 nt4.25□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 77.2 ms