Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 FDC1YDR539W 1512 nt3.61□□□□□ -1.83
LSM6Q06406 ADE3YGR204W 2841 nt3.61□□□□□ -1.83
LSM6Q06406 IMD3YLR432W 1572 nt3.61□□□□□ -1.83
LSM6Q06406 TFG2YGR005C 1203 nt3.61□□□□□ -1.83
LSM6Q06406 YHL034W-AYHL034W-A 462 nt3.61□□□□□ -1.83
LSM6Q06406 GPP1YIL053W 753 nt3.61□□□□□ -1.83
LSM6Q06406 YKL107WYKL107W 930 nt3.61□□□□□ -1.83
LSM6Q06406 SCW10YMR305C 1170 nt3.61□□□□□ -1.83
LSM6Q06406 TLG2YOL018C 1194 nt3.61□□□□□ -1.83
LSM6Q06406 AAD15YOL165C 432 nt3.61□□□□□ -1.83
LSM6Q06406 ARR3YPR201W 1215 nt3.61□□□□□ -1.83
LSM6Q06406 DCC1YCL016C 1143 nt3.61□□□□□ -1.83
LSM6Q06406 FUI1YBL042C 1920 nt3.61□□□□□ -1.83
LSM6Q06406 GDE1YPL110C 3672 nt3.61□□□□□ -1.83
LSM6Q06406 ABF1YKL112W 2196 nt3.61□□□□□ -1.83
LSM6Q06406 ATG7YHR171W 1893 nt3.6□□□□□ -1.83
LSM6Q06406 SKG3YLR187W 3081 nt3.6□□□□□ -1.83
LSM6Q06406 SDA1YGR245C 2304 nt3.6□□□□□ -1.83
LSM6Q06406 EUG1YDR518W 1554 nt3.6□□□□□ -1.83
LSM6Q06406 SPC97YHR172W 2472 nt3.6□□□□□ -1.83
LSM6Q06406 YCR006CYCR006C 474 nt3.6□□□□□ -1.83
LSM6Q06406 IWR1YDL115C 1062 nt3.6□□□□□ -1.83
LSM6Q06406 MSP1YGR028W 1089 nt3.6□□□□□ -1.83
LSM6Q06406 NAG1YGR031C-A 492 nt3.6□□□□□ -1.83
LSM6Q06406 KTI12YKL110C 942 nt3.6□□□□□ -1.83
LSM6Q06406 PIN2YOR104W 849 nt3.6□□□□□ -1.83
LSM6Q06406 CBC2YPL178W 627 nt3.6□□□□□ -1.83
LSM6Q06406 ISR1YPR106W 1332 nt3.6□□□□□ -1.83
LSM6Q06406 APJ1YNL077W 1587 nt3.59□□□□□ -1.83
LSM6Q06406 LYS2YBR115C 4179 nt3.59□□□□□ -1.83
LSM6Q06406 FYV1YDR024W 486 nt3.59□□□□□ -1.83
LSM6Q06406 YHL018WYHL018W 363 nt3.59□□□□□ -1.83
LSM6Q06406 TIF2YJL138C 1188 nt3.59□□□□□ -1.83
LSM6Q06406 TIF1YKR059W 1188 nt3.59□□□□□ -1.83
LSM6Q06406 QRI5YLR204W 336 nt3.59□□□□□ -1.83
LSM6Q06406 ARG1YOL058W 1263 nt3.59□□□□□ -1.83
LSM6Q06406 ZPS1YOL154W 750 nt3.59□□□□□ -1.83
LSM6Q06406 HST2YPL015C 1074 nt3.59□□□□□ -1.83
LSM6Q06406 TIF4632YGL049C 2745 nt3.59□□□□□ -1.83
LSM6Q06406 AIM17YHL021C 1398 nt3.59□□□□□ -1.83
LSM6Q06406 CDC1YDR182W 1476 nt3.59□□□□□ -1.84
LSM6Q06406 MPH2YDL247W 1830 nt3.58□□□□□ -1.84
LSM6Q06406 SAC1YKL212W 1872 nt3.58□□□□□ -1.84
LSM6Q06406 HRK1YOR267C 2280 nt3.58□□□□□ -1.84
LSM6Q06406 MBP1YDL056W 2502 nt3.58□□□□□ -1.84
LSM6Q06406 SCW4YGR279C 1161 nt3.58□□□□□ -1.84
LSM6Q06406 TDH2YJR009C 999 nt3.58□□□□□ -1.84
LSM6Q06406 GPI12YMR281W 915 nt3.58□□□□□ -1.84
LSM6Q06406 DOM34YNL001W 1161 nt3.58□□□□□ -1.84
LSM6Q06406 CBP3YPL215W 1008 nt3.58□□□□□ -1.84
LSM6Q06406 NOB1YOR056C 1380 nt3.58□□□□□ -1.84
LSM6Q06406 OLE1YGL055W 1533 nt3.58□□□□□ -1.84
LSM6Q06406 ADE4YMR300C 1533 nt3.58□□□□□ -1.84
LSM6Q06406 FRE1YLR214W 2061 nt3.58□□□□□ -1.84
LSM6Q06406 tK(CUU)CtK(CUU)C 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)D1tK(CUU)D1 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)D2tK(CUU)D2 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)E1tK(CUU)E1 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)E2tK(CUU)E2 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)FtK(CUU)F 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)G1tK(CUU)G1 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)G2tK(CUU)G2 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)G3tK(CUU)G3 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)ItK(CUU)I 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)JtK(CUU)J 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)KtK(CUU)K 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)MtK(CUU)M 73 nt3.57□□□□□ -1.84
LSM6Q06406 tK(CUU)PtK(CUU)P 73 nt3.57□□□□□ -1.84
LSM6Q06406 THP1YOL072W 1368 nt3.57□□□□□ -1.84
LSM6Q06406 TRS33YOR115C 807 nt3.57□□□□□ -1.84
LSM6Q06406 SKS1YPL026C 1509 nt3.57□□□□□ -1.84
LSM6Q06406 FZO1YBR179C 2568 nt3.57□□□□□ -1.84
LSM6Q06406 COR1YBL045C 1374 nt3.56□□□□□ -1.84
LSM6Q06406 ASA1YPR085C 1332 nt3.56□□□□□ -1.84
LSM6Q06406 YKR073CYKR073C 321 nt3.56□□□□□ -1.84
LSM6Q06406 YMR252CYMR252C 405 nt3.56□□□□□ -1.84
LSM6Q06406 COS10YNR075W 1125 nt3.56□□□□□ -1.84
LSM6Q06406 SFT2YBL102W 648 nt3.56□□□□□ -1.84
LSM6Q06406 PDR15YDR406W 4590 nt3.56□□□□□ -1.84
LSM6Q06406 FRS1YLR060W 1788 nt3.56□□□□□ -1.84
LSM6Q06406 TSL1YML100W 3297 nt3.55□□□□□ -1.84
LSM6Q06406 SKG6YHR149C 2205 nt3.55□□□□□ -1.84
LSM6Q06406 AVT3YKL146W 2079 nt3.55□□□□□ -1.84
LSM6Q06406 DOT5YIL010W 648 nt3.55□□□□□ -1.84
LSM6Q06406 RPR2YIR015W 435 nt3.55□□□□□ -1.84
LSM6Q06406 RPL3YOR063W 1164 nt3.55□□□□□ -1.84
LSM6Q06406 ATG12YBR217W 561 nt3.55□□□□□ -1.84
LSM6Q06406 ARC40YBR234C 1155 nt3.55□□□□□ -1.84
LSM6Q06406 KIC1YHR102W 3243 nt3.55□□□□□ -1.84
LSM6Q06406 MDM34YGL219C 1380 nt3.54□□□□□ -1.84
LSM6Q06406 YDL022C-AYDL022C-A 249 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)CtN(GUU)C 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)FtN(GUU)F 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)GtN(GUU)G 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)KtN(GUU)K 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)LtN(GUU)L 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)N1tN(GUU)N1 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)N2tN(GUU)N2 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)O1tN(GUU)O1 74 nt3.54□□□□□ -1.84
LSM6Q06406 tN(GUU)O2tN(GUU)O2 74 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms