Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.84■□□□□ 0.93
GFRA1P56159 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GFRA1P56159 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.84■□□□□ 0.93
GFRA1P56159 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GFRA1P56159 AC131274.2-201ENST00000580697 1507 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA1P56159 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.83■□□□□ 0.93
GFRA1P56159 AC142381.3-201ENST00000568208 1670 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 AP003733.4-201ENST00000623785 1697 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA1P56159 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GFRA1P56159 MIR6724-1-201ENST00000616420 92 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 MIR6724-2-201ENST00000616483 92 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 MIR6722-201ENST00000617286 78 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 MIR6724-4-201ENST00000617390 92 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 MIR6724-3-201ENST00000622482 92 ntBASIC20.83■□□□□ 0.93
GFRA1P56159 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
GFRA1P56159 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
GFRA1P56159 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
GFRA1P56159 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GFRA1P56159 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.83■□□□□ 0.92
GFRA1P56159 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA1P56159 HLA-L-211ENST00000482052 1765 ntBASIC20.82■□□□□ 0.92
GFRA1P56159 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA1P56159 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA1P56159 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
GFRA1P56159 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA1P56159 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA1P56159 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.82■□□□□ 0.92
GFRA1P56159 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.82■□□□□ 0.92
GFRA1P56159 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA1P56159 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
GFRA1P56159 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFRA1P56159 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GFRA1P56159 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.81■□□□□ 0.92
GFRA1P56159 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.81■□□□□ 0.92
GFRA1P56159 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA1P56159 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA1P56159 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA1P56159 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA1P56159 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA1P56159 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GFRA1P56159 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.8■□□□□ 0.92
GFRA1P56159 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA1P56159 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.8■□□□□ 0.92
GFRA1P56159 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA1P56159 AC138932.3-201ENST00000567634 1902 ntBASIC20.8■□□□□ 0.92
GFRA1P56159 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFRA1P56159 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.79■□□□□ 0.92
GFRA1P56159 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.79■□□□□ 0.92
GFRA1P56159 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.79■□□□□ 0.92
GFRA1P56159 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.79■□□□□ 0.92
GFRA1P56159 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GFRA1P56159 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA1P56159 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA1P56159 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFRA1P56159 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.78■□□□□ 0.92
GFRA1P56159 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA1P56159 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.78■□□□□ 0.92
GFRA1P56159 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA1P56159 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.78■□□□□ 0.92
GFRA1P56159 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA1P56159 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
GFRA1P56159 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFRA1P56159 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFRA1P56159 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GFRA1P56159 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GFRA1P56159 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFRA1P56159 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.77■□□□□ 0.92
GFRA1P56159 AL117332.1-201ENST00000622628 974 ntBASIC20.77■□□□□ 0.92
GFRA1P56159 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.77■□□□□ 0.92
GFRA1P56159 AL022069.1-201ENST00000568025 1636 ntBASIC20.77■□□□□ 0.92
GFRA1P56159 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GFRA1P56159 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GFRA1P56159 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA1P56159 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFRA1P56159 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.76■□□□□ 0.91
GFRA1P56159 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.76■□□□□ 0.91
GFRA1P56159 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.76■□□□□ 0.91
GFRA1P56159 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.76■□□□□ 0.91
GFRA1P56159 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
GFRA1P56159 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA1P56159 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GFRA1P56159 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA1P56159 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.75■□□□□ 0.91
GFRA1P56159 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA1P56159 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.75■□□□□ 0.91
GFRA1P56159 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA1P56159 MIR3621-201ENST00000580529 85 ntBASIC20.75■□□□□ 0.91
GFRA1P56159 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.75■□□□□ 0.91
GFRA1P56159 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA1P56159 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFRA1P56159 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GFRA1P56159 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA1P56159 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA1P56159 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA1P56159 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GFRA1P56159 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GFRA1P56159 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.74■□□□□ 0.91
GFRA1P56159 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms