Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx4P53776 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx4P53776 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx4P53776 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.48■□□□□ 0.39
Lhx4P53776 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.48■□□□□ 0.39
Lhx4P53776 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx4P53776 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx4P53776 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx4P53776 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lhx4P53776 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.47■□□□□ 0.39
Lhx4P53776 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx4P53776 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx4P53776 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lhx4P53776 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.46■□□□□ 0.39
Lhx4P53776 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Lhx4P53776 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.46■□□□□ 0.39
Lhx4P53776 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.46■□□□□ 0.39
Lhx4P53776 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx4P53776 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx4P53776 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx4P53776 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx4P53776 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lhx4P53776 Notumos-201ENSMUST00000151998 2659 ntBASIC17.45■□□□□ 0.38
Lhx4P53776 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.45■□□□□ 0.38
Lhx4P53776 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.45■□□□□ 0.38
Lhx4P53776 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lhx4P53776 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx4P53776 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.45■□□□□ 0.38
Lhx4P53776 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx4P53776 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Lhx4P53776 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx4P53776 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx4P53776 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Lhx4P53776 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx4P53776 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.44■□□□□ 0.38
Lhx4P53776 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx4P53776 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx4P53776 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
Lhx4P53776 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Lhx4P53776 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Rps24-207ENSMUST00000224568 714 ntBASIC17.43■□□□□ 0.38
Lhx4P53776 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lhx4P53776 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx4P53776 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.43■□□□□ 0.38
Lhx4P53776 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lhx4P53776 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.42■□□□□ 0.38
Lhx4P53776 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lhx4P53776 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.42■□□□□ 0.38
Lhx4P53776 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx4P53776 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lhx4P53776 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.41■□□□□ 0.38
Lhx4P53776 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.41■□□□□ 0.38
Lhx4P53776 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx4P53776 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx4P53776 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Lhx4P53776 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx4P53776 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx4P53776 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx4P53776 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx4P53776 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms