Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX2P48378 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX2P48378 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RFX2P48378 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX2P48378 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX2P48378 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX2P48378 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX2P48378 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RFX2P48378 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX2P48378 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFX2P48378 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX2P48378 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.06■□□□□ 0.8
RFX2P48378 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFX2P48378 AL359504.2-201ENST00000605506 1601 ntBASIC20.05■□□□□ 0.8
RFX2P48378 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX2P48378 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RFX2P48378 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX2P48378 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
RFX2P48378 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX2P48378 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX2P48378 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX2P48378 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX2P48378 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.04■□□□□ 0.8
RFX2P48378 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX2P48378 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 MIR219A2-201ENST00000608502 1504 ntBASIC20.04■□□□□ 0.8
RFX2P48378 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFX2P48378 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFX2P48378 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX2P48378 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.04■□□□□ 0.8
RFX2P48378 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX2P48378 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX2P48378 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX2P48378 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX2P48378 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX2P48378 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX2P48378 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RFX2P48378 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX2P48378 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX2P48378 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.02■□□□□ 0.8
RFX2P48378 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX2P48378 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX2P48378 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RFX2P48378 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX2P48378 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX2P48378 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX2P48378 AL359258.2-201ENST00000564063 1566 ntBASIC20.01■□□□□ 0.79
RFX2P48378 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RFX2P48378 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX2P48378 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RFX2P48378 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFX2P48378 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RFX2P48378 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX2P48378 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX2P48378 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX2P48378 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RFX2P48378 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX2P48378 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX2P48378 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RFX2P48378 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20■□□□□ 0.79
RFX2P48378 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX2P48378 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RFX2P48378 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RFX2P48378 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20■□□□□ 0.79
RFX2P48378 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RFX2P48378 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX2P48378 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX2P48378 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RFX2P48378 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RFX2P48378 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX2P48378 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX2P48378 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX2P48378 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX2P48378 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX2P48378 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX2P48378 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX2P48378 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.99■□□□□ 0.79
RFX2P48378 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX2P48378 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RFX2P48378 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RFX2P48378 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RFX2P48378 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX2P48378 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX2P48378 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms