Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CD40P25942 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CD40P25942 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD40P25942 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CD40P25942 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.98■□□□□ 0.79
CD40P25942 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.98■□□□□ 0.79
CD40P25942 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.98■□□□□ 0.79
CD40P25942 AC131281.2-201ENST00000520478 145 ntBASIC19.98■□□□□ 0.79
CD40P25942 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.98■□□□□ 0.79
CD40P25942 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.98■□□□□ 0.79
CD40P25942 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CD40P25942 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CD40P25942 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CD40P25942 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.97■□□□□ 0.79
CD40P25942 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.97■□□□□ 0.79
CD40P25942 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CD40P25942 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CD40P25942 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.97■□□□□ 0.79
CD40P25942 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CD40P25942 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.96■□□□□ 0.79
CD40P25942 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CD40P25942 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.96■□□□□ 0.79
CD40P25942 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CD40P25942 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CD40P25942 AC131274.2-201ENST00000580697 1507 ntBASIC19.96■□□□□ 0.79
CD40P25942 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CD40P25942 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD40P25942 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.95■□□□□ 0.78
CD40P25942 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CD40P25942 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.95■□□□□ 0.78
CD40P25942 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.95■□□□□ 0.78
CD40P25942 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD40P25942 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CD40P25942 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CD40P25942 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CD40P25942 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.94■□□□□ 0.78
CD40P25942 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CD40P25942 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.94■□□□□ 0.78
CD40P25942 AL022069.1-201ENST00000568025 1636 ntBASIC19.94■□□□□ 0.78
CD40P25942 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD40P25942 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CD40P25942 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 AC022211.4-201ENST00000625094 2161 ntBASIC19.93■□□□□ 0.78
CD40P25942 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.93■□□□□ 0.78
CD40P25942 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.93■□□□□ 0.78
CD40P25942 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.93■□□□□ 0.78
CD40P25942 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.93■□□□□ 0.78
CD40P25942 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CD40P25942 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CD40P25942 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.93■□□□□ 0.78
CD40P25942 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
CD40P25942 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 AL136116.3-201ENST00000402907 1138 ntBASIC19.92■□□□□ 0.78
CD40P25942 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.92■□□□□ 0.78
CD40P25942 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.92■□□□□ 0.78
CD40P25942 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.92■□□□□ 0.78
CD40P25942 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.92■□□□□ 0.78
CD40P25942 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.92■□□□□ 0.78
CD40P25942 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CD40P25942 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CD40P25942 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.91■□□□□ 0.78
CD40P25942 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CD40P25942 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CD40P25942 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD40P25942 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CD40P25942 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD40P25942 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms