Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SP9P0CG40 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SP9P0CG40 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
SP9P0CG40 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SP9P0CG40 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SP9P0CG40 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.2■■□□□ 1.3
SP9P0CG40 AC136469.2-201ENST00000623944 1028 ntBASIC23.2■■□□□ 1.3
SP9P0CG40 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.19■■□□□ 1.3
SP9P0CG40 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SP9P0CG40 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SP9P0CG40 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.18■■□□□ 1.3
SP9P0CG40 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.18■■□□□ 1.3
SP9P0CG40 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SP9P0CG40 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L2-201ENST00000561772 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L6-201ENST00000626483 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L1-201ENST00000627662 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L8-201ENST00000629013 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L3-201ENST00000630187 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L7-201ENST00000630678 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 DUX4L5-201ENST00000630834 1275 ntBASIC23.18■■□□□ 1.3
SP9P0CG40 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SP9P0CG40 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SP9P0CG40 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SP9P0CG40 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SP9P0CG40 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SP9P0CG40 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SP9P0CG40 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.17■■□□□ 1.3
SP9P0CG40 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.17■■□□□ 1.3
SP9P0CG40 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.17■■□□□ 1.3
SP9P0CG40 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.17■■□□□ 1.3
SP9P0CG40 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SP9P0CG40 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.17■■□□□ 1.3
SP9P0CG40 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
SP9P0CG40 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SP9P0CG40 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SP9P0CG40 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.16■■□□□ 1.3
SP9P0CG40 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SP9P0CG40 BX842568.3-201ENST00000418104 571 ntBASIC23.16■■□□□ 1.3
SP9P0CG40 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SP9P0CG40 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SP9P0CG40 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SP9P0CG40 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SP9P0CG40 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SP9P0CG40 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SP9P0CG40 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SP9P0CG40 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SP9P0CG40 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.15■■□□□ 1.3
SP9P0CG40 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.15■■□□□ 1.3
SP9P0CG40 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SP9P0CG40 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SP9P0CG40 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
SP9P0CG40 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SP9P0CG40 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SP9P0CG40 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SP9P0CG40 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.14■■□□□ 1.29
SP9P0CG40 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SP9P0CG40 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.14■■□□□ 1.29
SP9P0CG40 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.13■■□□□ 1.29
SP9P0CG40 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.13■■□□□ 1.29
SP9P0CG40 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.13■■□□□ 1.29
SP9P0CG40 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SP9P0CG40 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SP9P0CG40 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SP9P0CG40 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SP9P0CG40 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SP9P0CG40 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SP9P0CG40 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SP9P0CG40 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SP9P0CG40 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SP9P0CG40 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
SP9P0CG40 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.11■■□□□ 1.29
SP9P0CG40 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SP9P0CG40 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.11■■□□□ 1.29
SP9P0CG40 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
SP9P0CG40 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.11■■□□□ 1.29
SP9P0CG40 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.11■■□□□ 1.29
SP9P0CG40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SP9P0CG40 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SP9P0CG40 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SP9P0CG40 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.11■■□□□ 1.29
SP9P0CG40 AC009102.2-201ENST00000606772 1639 ntBASIC23.11■■□□□ 1.29
SP9P0CG40 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
SP9P0CG40 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.1■■□□□ 1.29
SP9P0CG40 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.1■■□□□ 1.29
SP9P0CG40 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.1■■□□□ 1.29
SP9P0CG40 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.1■■□□□ 1.29
SP9P0CG40 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.1■■□□□ 1.29
SP9P0CG40 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.1■■□□□ 1.29
SP9P0CG40 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms