Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDGFBP01127 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDGFBP01127 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDGFBP01127 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
PDGFBP01127 AL138724.1-201ENST00000606771 1088 ntBASIC23.62■■□□□ 1.37
PDGFBP01127 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
PDGFBP01127 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDGFBP01127 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDGFBP01127 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDGFBP01127 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDGFBP01127 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PDGFBP01127 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PDGFBP01127 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PDGFBP01127 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDGFBP01127 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.6■■□□□ 1.37
PDGFBP01127 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDGFBP01127 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDGFBP01127 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.6■■□□□ 1.37
PDGFBP01127 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.6■■□□□ 1.37
PDGFBP01127 YBX1P1-201ENST00000445822 960 ntBASIC23.6■■□□□ 1.37
PDGFBP01127 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.6■■□□□ 1.37
PDGFBP01127 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDGFBP01127 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.6■■□□□ 1.37
PDGFBP01127 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDGFBP01127 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDGFBP01127 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.59■■□□□ 1.37
PDGFBP01127 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PDGFBP01127 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDGFBP01127 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.59■■□□□ 1.37
PDGFBP01127 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.59■■□□□ 1.37
PDGFBP01127 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.59■■□□□ 1.37
PDGFBP01127 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PDGFBP01127 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
PDGFBP01127 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDGFBP01127 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDGFBP01127 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.58■■□□□ 1.37
PDGFBP01127 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PDGFBP01127 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.58■■□□□ 1.37
PDGFBP01127 HLA-L-209ENST00000420110 1011 ntBASIC23.58■■□□□ 1.37
PDGFBP01127 AC233992.3-201ENST00000607491 485 ntBASIC23.58■■□□□ 1.37
PDGFBP01127 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PDGFBP01127 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
PDGFBP01127 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDGFBP01127 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDGFBP01127 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDGFBP01127 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PDGFBP01127 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDGFBP01127 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.57■■□□□ 1.36
PDGFBP01127 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.57■■□□□ 1.36
PDGFBP01127 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDGFBP01127 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDGFBP01127 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDGFBP01127 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDGFBP01127 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDGFBP01127 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.56■■□□□ 1.36
PDGFBP01127 AC136469.2-201ENST00000623944 1028 ntBASIC23.56■■□□□ 1.36
PDGFBP01127 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.56■■□□□ 1.36
PDGFBP01127 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PDGFBP01127 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.56■■□□□ 1.36
PDGFBP01127 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
PDGFBP01127 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDGFBP01127 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PDGFBP01127 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.55■■□□□ 1.36
PDGFBP01127 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.55■■□□□ 1.36
PDGFBP01127 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PDGFBP01127 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDGFBP01127 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDGFBP01127 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDGFBP01127 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDGFBP01127 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.54■■□□□ 1.36
PDGFBP01127 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.54■■□□□ 1.36
PDGFBP01127 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.54■■□□□ 1.36
PDGFBP01127 ESRRAP2-201ENST00000418437 1549 ntBASIC23.54■■□□□ 1.36
PDGFBP01127 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PDGFBP01127 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDGFBP01127 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDGFBP01127 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDGFBP01127 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PDGFBP01127 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PDGFBP01127 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.53■■□□□ 1.36
PDGFBP01127 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDGFBP01127 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PDGFBP01127 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.52■■□□□ 1.36
PDGFBP01127 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.52■■□□□ 1.36
PDGFBP01127 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDGFBP01127 BX842568.3-201ENST00000418104 571 ntBASIC23.52■■□□□ 1.36
PDGFBP01127 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.52■■□□□ 1.36
PDGFBP01127 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PDGFBP01127 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PDGFBP01127 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PDGFBP01127 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PDGFBP01127 AC006455.2-201ENST00000429931 906 ntBASIC23.51■■□□□ 1.35
PDGFBP01127 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.51■■□□□ 1.35
PDGFBP01127 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms