Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PGK1P00558 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.97■■□□□ 1.75
PGK1P00558 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PGK1P00558 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.97■■□□□ 1.75
PGK1P00558 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PGK1P00558 AC091305.1-201ENST00000479476 895 ntBASIC25.97■■□□□ 1.75
PGK1P00558 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
PGK1P00558 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.97■■□□□ 1.75
PGK1P00558 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.97■■□□□ 1.75
PGK1P00558 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.97■■□□□ 1.75
PGK1P00558 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PGK1P00558 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PGK1P00558 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PGK1P00558 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PGK1P00558 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.96■■□□□ 1.75
PGK1P00558 MIR6821-201ENST00000617625 74 ntBASIC25.96■■□□□ 1.75
PGK1P00558 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.96■■□□□ 1.75
PGK1P00558 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PGK1P00558 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.95■■□□□ 1.75
PGK1P00558 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.95■■□□□ 1.74
PGK1P00558 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.95■■□□□ 1.74
PGK1P00558 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PGK1P00558 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PGK1P00558 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PGK1P00558 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.94■■□□□ 1.74
PGK1P00558 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.94■■□□□ 1.74
PGK1P00558 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.94■■□□□ 1.74
PGK1P00558 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PGK1P00558 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.94■■□□□ 1.74
PGK1P00558 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.94■■□□□ 1.74
PGK1P00558 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PGK1P00558 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PGK1P00558 SERBP1P1-201ENST00000396021 1160 ntBASIC25.93■■□□□ 1.74
PGK1P00558 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PGK1P00558 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.93■■□□□ 1.74
PGK1P00558 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.93■■□□□ 1.74
PGK1P00558 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PGK1P00558 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.92■■□□□ 1.74
PGK1P00558 AC097381.1-201ENST00000429019 1296 ntBASIC25.92■■□□□ 1.74
PGK1P00558 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PGK1P00558 AC087623.3-201ENST00000607047 1098 ntBASIC25.92■■□□□ 1.74
PGK1P00558 AC092171.4-201ENST00000609130 632 ntBASIC25.92■■□□□ 1.74
PGK1P00558 CA15P2-201ENST00000611168 834 ntBASIC25.92■■□□□ 1.74
PGK1P00558 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PGK1P00558 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PGK1P00558 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PGK1P00558 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PGK1P00558 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.92■■□□□ 1.74
PGK1P00558 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PGK1P00558 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PGK1P00558 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.91■■□□□ 1.74
PGK1P00558 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.91■■□□□ 1.74
PGK1P00558 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PGK1P00558 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PGK1P00558 AC010501.1-201ENST00000606270 1962 ntBASIC25.91■■□□□ 1.74
PGK1P00558 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PGK1P00558 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PGK1P00558 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PGK1P00558 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PGK1P00558 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
PGK1P00558 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
PGK1P00558 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PGK1P00558 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PGK1P00558 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PGK1P00558 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.9■■□□□ 1.74
PGK1P00558 AC099791.2-201ENST00000605725 427 ntBASIC25.9■■□□□ 1.74
PGK1P00558 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PGK1P00558 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PGK1P00558 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.9■■□□□ 1.74
PGK1P00558 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PGK1P00558 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
PGK1P00558 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
PGK1P00558 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PGK1P00558 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.89■■□□□ 1.74
PGK1P00558 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PGK1P00558 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PGK1P00558 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PGK1P00558 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PGK1P00558 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PGK1P00558 RASA4CP-201ENST00000424092 1398 ntBASIC25.88■■□□□ 1.73
PGK1P00558 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PGK1P00558 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PGK1P00558 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.87■■□□□ 1.73
PGK1P00558 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PGK1P00558 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PGK1P00558 AC131274.2-201ENST00000580697 1507 ntBASIC25.87■■□□□ 1.73
PGK1P00558 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PGK1P00558 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.86■■□□□ 1.73
PGK1P00558 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PGK1P00558 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PGK1P00558 AL162430.1-201ENST00000480705 870 ntBASIC25.86■■□□□ 1.73
PGK1P00558 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.86■■□□□ 1.73
PGK1P00558 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.86■■□□□ 1.73
PGK1P00558 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.85■■□□□ 1.73
PGK1P00558 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.85■■□□□ 1.73
PGK1P00558 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PGK1P00558 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PGK1P00558 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PGK1P00558 AC008764.7-201ENST00000593779 1081 ntBASIC25.85■■□□□ 1.73
PGK1P00558 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms