Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRAMEF11O60813 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PRAMEF11O60813 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.55■■□□□ 1.36
PRAMEF11O60813 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PRAMEF11O60813 LINC01124-201ENST00000409786 2117 ntBASIC23.54■■□□□ 1.36
PRAMEF11O60813 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRAMEF11O60813 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PRAMEF11O60813 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.54■■□□□ 1.36
PRAMEF11O60813 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.54■■□□□ 1.36
PRAMEF11O60813 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRAMEF11O60813 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRAMEF11O60813 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRAMEF11O60813 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PRAMEF11O60813 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PRAMEF11O60813 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.53■■□□□ 1.36
PRAMEF11O60813 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
PRAMEF11O60813 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PRAMEF11O60813 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRAMEF11O60813 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRAMEF11O60813 AL022069.1-201ENST00000568025 1636 ntBASIC23.52■■□□□ 1.36
PRAMEF11O60813 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PRAMEF11O60813 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRAMEF11O60813 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRAMEF11O60813 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.52■■□□□ 1.36
PRAMEF11O60813 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PRAMEF11O60813 AC141586.4-201ENST00000624558 1573 ntBASIC23.52■■□□□ 1.36
PRAMEF11O60813 LINC00543-201ENST00000567234 1845 ntBASIC23.52■■□□□ 1.36
PRAMEF11O60813 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.51■■□□□ 1.35
PRAMEF11O60813 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.51■■□□□ 1.35
PRAMEF11O60813 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.51■■□□□ 1.35
PRAMEF11O60813 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 AC092028.1-203ENST00000608262 953 ntBASIC23.51■■□□□ 1.35
PRAMEF11O60813 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PRAMEF11O60813 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PRAMEF11O60813 AL161729.1-201ENST00000604104 1402 ntBASIC23.5■■□□□ 1.35
PRAMEF11O60813 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRAMEF11O60813 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRAMEF11O60813 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PRAMEF11O60813 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.5■■□□□ 1.35
PRAMEF11O60813 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.5■■□□□ 1.35
PRAMEF11O60813 SNX5-217ENST00000606557 1087 ntBASIC23.5■■□□□ 1.35
PRAMEF11O60813 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PRAMEF11O60813 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.5■■□□□ 1.35
PRAMEF11O60813 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PRAMEF11O60813 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PRAMEF11O60813 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PRAMEF11O60813 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 AC004448.1-201ENST00000458332 883 ntBASIC23.49■■□□□ 1.35
PRAMEF11O60813 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.49■■□□□ 1.35
PRAMEF11O60813 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.49■■□□□ 1.35
PRAMEF11O60813 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PRAMEF11O60813 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PRAMEF11O60813 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PRAMEF11O60813 GUSBP5-201ENST00000418136 578 ntBASIC23.48■■□□□ 1.35
PRAMEF11O60813 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.48■■□□□ 1.35
PRAMEF11O60813 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PRAMEF11O60813 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PRAMEF11O60813 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PRAMEF11O60813 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.48■■□□□ 1.35
PRAMEF11O60813 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PRAMEF11O60813 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PRAMEF11O60813 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PRAMEF11O60813 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PRAMEF11O60813 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PRAMEF11O60813 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PRAMEF11O60813 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PRAMEF11O60813 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
PRAMEF11O60813 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PRAMEF11O60813 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PRAMEF11O60813 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PRAMEF11O60813 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PRAMEF11O60813 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PRAMEF11O60813 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
PRAMEF11O60813 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms